| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0962 |
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| Symbol | |
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| ID | 5104514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 889304 |
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| End bp | 890020 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640506864 |
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| Product | phosphoadenosine phosphosulfate reductase |
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| Protein accession | YP_001191057 |
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| Protein GI | 146303741 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes |
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| TIGRFAM ID | [TIGR00434] phosophoadenylyl-sulfate reductase (thioredoxin)
[TIGR02055] thioredoxin-dependent adenylylsulfate APS reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000110311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.512598 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTAGAT TCAAGGAAGA GGAGATAGCC GTGCTTTCTC GCGAAATGGA GACCATGAGT
GCAGAACGCA TCATAGGGTG GGCAGTAGAG AACTTTCAGG ACAGGTTAGC AATAGCCTCT
AGCTTTCAGG TGGAGGATAT GGTAATCTTA GACATAGCCT CAAGGTACGG GAAAGTTAGG
GTTTTCACCA TAGACACGGG AAGGCTACCT CAGGAGACCT ACGATCTTAT CGATGTAGTC
AGGGAAAGAT ATGGGATCAA AGTGGAGGTA TTTTTCCCTA AACCTGAGGA TGTAGAGAAG
ATGGTAAGGG AGCATGGGGT AAATCTGTTT TACAATAGCG TGAAGCTCAG GCAAATGTGC
TGCTGGAATA GGAAGGTGAA GCCACTTAAG AGGGCCCTTG AGGGGATAGA CGCGTGGATG
ACTGGTTTAA GAAGAGAACA GTGGGAGACT AGGAGTTCTG TGAGGAAGAT TGAAGTGGAC
ACAATTCACG GAAATATCGT CAAGATCAAT CCGCTTGCGG ACTGGACTTG GGAACAGGTG
TGGAAATACG TAAAAGAGAA AGACGTACCA TATAACGCCC TTTATAATAA GGGCTACATG
AGTATAGGCT GCCTTCCATG TACAAGACCG GTCAGGCCTG GAGAGCATCC CAGGGCTGGA
AGGTGGTGGT GGGAGCAAGG GAACAAGGAA TGCGGGATTC ATGTCGGAGG CGAGTGA
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| Protein sequence | MSRFKEEEIA VLSREMETMS AERIIGWAVE NFQDRLAIAS SFQVEDMVIL DIASRYGKVR
VFTIDTGRLP QETYDLIDVV RERYGIKVEV FFPKPEDVEK MVREHGVNLF YNSVKLRQMC
CWNRKVKPLK RALEGIDAWM TGLRREQWET RSSVRKIEVD TIHGNIVKIN PLADWTWEQV
WKYVKEKDVP YNALYNKGYM SIGCLPCTRP VRPGEHPRAG RWWWEQGNKE CGIHVGGE
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