Gene Msed_0961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0961 
Symbol 
ID5104513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp887395 
End bp889194 
Gene Length1800 bp 
Protein Length599 aa 
Translation table11 
GC content47% 
IMG OID640506863 
Productsulfite reductase (NADPH) beta subunit 
Protein accessionYP_001191056 
Protein GI146303740 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0155] Sulfite reductase, beta subunit (hemoprotein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000332395 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.245939 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATTAA GGGATAGGCT AATAGAGCCT GAGTTTAGGA CTTCCCCGGA TAGGTGGAGT 
GAGGAAGAGA AAATCAAGTA TAAAACAAGG GGATTTACCG AGATTCCTGA CTCGGTCGTC
CACGAATTGA AGGACGAGAA GGACGAGTTG AGCTATGAAA CCTCGATTAT AGCCAAGTCA
TGTGGAATAT ACCTTGAGTT CAACAGGGAT AAGTTCAGGG AGACCAGAGA GAAGGACTAC
ATCTACATGA TAAGGATAGT AATCCCGGGC GGAGGACCAA TAACGGCGAA ACAGTGGGAA
ATCCTAGATG AGATAAGCAA CAGATATACG GTGTCTGACG CATACACAAA GGACCCTAAA
CCCTCATTGA GGCTCACCAC GAGGCAGGAT ATTCAACTCC ATCATGTTAA GAAGAGGGAC
CTGCTCAACG CAATTCAAGA TATAGTTAGA TCTGGATTTT TCACCCTAAA CGGTTGCGGG
GATAACGTTA GAAACGTTGT GGCCTGTCCC TTATCCTTCT TTTCCTCAAT ATTTAACTCC
AATTCTCTAG CAAAGGAAAT AGCCAACTAC TTTAGGTTGC CCACTGGACC ATATATCCAG
GTCTTTGAGC TAGACTCAGT TTCGCATCTA GATACCTCAA TTACGCATGA GGGGAGATTC
CGTTACTCGG CAAGTCTTCT CAATAGGAAG TTCAAGATTG CGATCTCTGC CCTCCATTTG
ATGGAGGGAA AGTTGGTGAG GGACAACTGC GTAGAGGCTA CCACCAATGA CATAGGTATT
GTTCCGGTGG ATGGAAAGCT CTTTCAGTTA TACGTAGGAG GGGGACAGGG GGAGAACCAG
GGATTCTCCA CTTTTTCCAC TCTCGGAAAG CCTCTGGGGG TATTTAACCG AGAGGAATTG
GTGAGGGCCC TGGACGTTCT AGTGAACATA CAACAGGAGT GGGGTGATAG GAAAAACAGG
CATTGGGCGA GAATGAAGTA CCTAGTCTAC AAAATGGGGA TAGAGTGGTT GAGGGAAAAG
ATTAGGGAAA CAGGTCTAGA ACCCGAGCCT CCCTTGGATC TAGACGTGGG GGATAGAATG
CTTCACCTGG GGCCTATTAG AACAGAGGTA GAGGCTTACG GAATATTTGT GGAAAACGGT
AGAGTAATAG ATAGGGAAGA CTCCAAGTAT AAGACTGGGC TCCTAGAGAT GGTGAGGAGC
TACCCAGATG CCAAGATTTT CATCACGCCA AACCAGCATC TTATTGTGAC TGGTATAGAT
GACCTTAGGG AATTTGAGGT CTTTATGTCA AGATTTCTGA AAAAGCCGAC CAACCTAAGG
ATGCATGCTA CTGCGTGTGT TGGCTTCCCC ACCTGTAAGC TATCGTATAC TGACAGCGAG
AGATTTCTCC CAAGGTTAAT TGGGGAGCTC GAGAGGAGAT GGGGAGACCT GAAGGAAACC
ATAGGTATTT CAGGATGTCT AGCTCAGTGT TCCAGGCCCG GGACCAAGAC CTTAGGATGG
GTAGGGACTG GATATAATCT CTACATGCTC AAGGTTGGAG GCGATTCGTC GGGGAGATTC
CAGGGGAATC CCCTAATTGA TCCAGATACA GGGGATGTAT ACCTTACCCA TGTACCTGGA
AACAGGTTGG CGGATGTAAC TGACGCGCTA TTCGAGCTTT ACTCGACCCA TGGCAATGGG
GAGGGAATGG GTCAGTTCCT CAGGAAGTTG GGAAATAAAA GAATCATAGA GTATCTGAAG
AACAATCCCA AAACATCTGA CCTTATGACT CCATCAAAAC TAAGGGCGAC TTTGGATTGA
 
Protein sequence
MILRDRLIEP EFRTSPDRWS EEEKIKYKTR GFTEIPDSVV HELKDEKDEL SYETSIIAKS 
CGIYLEFNRD KFRETREKDY IYMIRIVIPG GGPITAKQWE ILDEISNRYT VSDAYTKDPK
PSLRLTTRQD IQLHHVKKRD LLNAIQDIVR SGFFTLNGCG DNVRNVVACP LSFFSSIFNS
NSLAKEIANY FRLPTGPYIQ VFELDSVSHL DTSITHEGRF RYSASLLNRK FKIAISALHL
MEGKLVRDNC VEATTNDIGI VPVDGKLFQL YVGGGQGENQ GFSTFSTLGK PLGVFNREEL
VRALDVLVNI QQEWGDRKNR HWARMKYLVY KMGIEWLREK IRETGLEPEP PLDLDVGDRM
LHLGPIRTEV EAYGIFVENG RVIDREDSKY KTGLLEMVRS YPDAKIFITP NQHLIVTGID
DLREFEVFMS RFLKKPTNLR MHATACVGFP TCKLSYTDSE RFLPRLIGEL ERRWGDLKET
IGISGCLAQC SRPGTKTLGW VGTGYNLYML KVGGDSSGRF QGNPLIDPDT GDVYLTHVPG
NRLADVTDAL FELYSTHGNG EGMGQFLRKL GNKRIIEYLK NNPKTSDLMT PSKLRATLD