| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0866 |
|---|
| Symbol | |
|---|
| ID | 5105225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | - |
|---|
| Start bp | 798923 |
|---|
| End bp | 800299 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640506770 |
|---|
| Product | general substrate transporter |
|---|
| Protein accession | YP_001190963 |
|---|
| Protein GI | 146303647 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.580989 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.629225 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGATA TATTTAAACC GTTAGACGAG AAAAGGCTTT CCTTTTTCCA TATCAAATCC
CTTGTGACCA CGGGAATGGG TGTTTTCACC GATGGATATG ACCTTTCCTC CATTGGTATT
GTCCTCCTGT TAGTCCTCTC GGAGTTCGGA ATAACGTCAA AGAGCCCAGA TTACGTTTCC
CTTACTGCGG CAATTTCCGG ATCCGCGCTA GCAGGGGCTG CAATAGGCGC CATAATCTTT
GGTTTGCTAT CTAACCAGGG AAGGAAGAAG TTTTACGGGA TCGACGTAAC CCTCATGACA
GTGGGAGCCC TCTTACAGGC CTTCGTGACA GATCCCACAG AGTTGATAAT AGTTAGGTTC
CTTTTAGGAC TAGGAGTCGG TGCCGACTAC GTTCTATCTC CCATGATCAT GGCTGAGCAC
GCTAACGCCA AGGATAGGGG AAAGATAATT GCTCTAGGAT TTGGTTTGTT TTGGGGATTT
GGCGCGACGC TAGCAGCTAT TCTATATCTT GCCCTACAGG CGGCAGGGGT ACCTCCTTCA
CTAGTCTGGA GAATTGTGCT GGCAGCAGGT GCGATACCCT CAGCTTCTGT GATCTATCTG
CGAAGAAAGA TTCCTGAAAC TGCGAGATTC CTTGGAAGGA TAAGGGGAGA TACTGAGGGA
GTGAAGGGAG TAATTAGGGA AGTCACGGGA ACCGAGGTAA ATCTCACCTC TAATCTCAAG
GATAACACTA GCTTCGGCGA GTACTTCAGG AGGAACTGGG CACTTTTCCT ATCGGCATGT
ATACTTTGGT TCCTCTTTGA CATAGTGGCG TACTCGGGAA TATTGTTTGG TCCAAGCCTC
ATTGCGAGCA GTCTAGGAAT TAATTCAGGA GTATTTCAAC TTTTAATTGA AGGAGCCTTC
ACCATACCTG GAGGGATAAT AGCTCTGTCC TTGATTGACA GAGTTGGAAG GAAACCACTG
CAGGTTGTAG GATTCGTGGT AATGGCAGTT GCCTTAATGT CCTTTGCCTT TTACAAGAGT
TCAGCTGGGG CATCTTTCTC ACCTATTATA GCCTTCTTCC TTTACGGACT GCAGAACTTG
GGGTCACAGG CTGGACCTGG CTCAGTATCC GCATCAGGAA TTCTTGGGGT AGAGCTTGCT
CCAACCAAGG TAAGAGGACT GGTGCAGTCA CTAACAGTGG CATCAGGAAG AATAGGAGCC
ACTCTGACAT CCTTCGTCTT TCCATCACTT TTCCATGAGT ACGGCGAGTC GTTTGCTGTG
TATTTCCTTG CAACCATAGC GGCAATTGCT GCGGTCATAA CTTTAGTAGC CATACCTGAA
ACGAAGAGGA AACCGTTGGA AGAGTCCTCT AGAGAAGTAA GTGTAGAGAC TGCGTGA
|
|---|
| Protein sequence | MKDIFKPLDE KRLSFFHIKS LVTTGMGVFT DGYDLSSIGI VLLLVLSEFG ITSKSPDYVS
LTAAISGSAL AGAAIGAIIF GLLSNQGRKK FYGIDVTLMT VGALLQAFVT DPTELIIVRF
LLGLGVGADY VLSPMIMAEH ANAKDRGKII ALGFGLFWGF GATLAAILYL ALQAAGVPPS
LVWRIVLAAG AIPSASVIYL RRKIPETARF LGRIRGDTEG VKGVIREVTG TEVNLTSNLK
DNTSFGEYFR RNWALFLSAC ILWFLFDIVA YSGILFGPSL IASSLGINSG VFQLLIEGAF
TIPGGIIALS LIDRVGRKPL QVVGFVVMAV ALMSFAFYKS SAGASFSPII AFFLYGLQNL
GSQAGPGSVS ASGILGVELA PTKVRGLVQS LTVASGRIGA TLTSFVFPSL FHEYGESFAV
YFLATIAAIA AVITLVAIPE TKRKPLEESS REVSVETA
|
|---|
| |