| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0815 |
|---|
| Symbol | |
|---|
| ID | 5105138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 747541 |
|---|
| End bp | 748371 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640506720 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
|---|
| Protein accession | YP_001190914 |
|---|
| Protein GI | 146303598 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.274994 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCAAA CCCCACAAAT TCAACTAGAT ATAAGACAAG GCGGAGTCCA GAAGGCTCTG
CCCTATACCC CTGTGGCTAA CTACGCGATC ATAACTGACC TAAACAAGTG CTTCGGTTGT
GCAGGTTGTC AGATGTCTTG TAAGGAGTGG AACACCTCAG GAATGTTCGG ACCCTTACCT
GACCTGGATC CCTACGGCAA CCTTGATGTC ATGTTCTGGC TAAGGGTACT CTACGTCGAG
GTTGGTAATT ATCCTCAAAC CAAGGTTTAC AACATCCCCA TAAACTGCTT CCACTGCATG
AATGCTCCCT GCGTAGAGGT TTGTCCCGTT GGCGCTACCT TCAAGAGGAC GCAGGACGGA
ATAGTGCTCG TGGATTATGA GGAATGCATA GGAACTAAGT ACTGCATTTA CGCCTGCCCC
TACGGTAACA GGTTCTTCGA CTACGTTGAG GGCGTAACAA AGAAGTGCAC TCACTGCTTC
GACAGGATTT ATGATCCAAC ACTTCCACCC GAGGAAAGAA TACCCGCCTG CATTCACGGA
TGTATGGTTC AGGCAAGGAT ATGGGCAAAC AGGTTAGACC CCACAGACCC AGGGAATATC
CTCTTTGTGG ATAAGGGAGG ATTTGTCCTT GGACCAGAGA CAGGAGCTAA CCCAGCTAGC
GGTTACCTGC CCTGGCACAG CGCATATGCA GCTGACAATG ACGTGGAATT GCTAAGCGAG
TCACAGTACT ACAATGTCTG GACCTCTAAC GGAGTGGTTC AGCTAGGCGC ACAGGGGAAC
AACTCGACCT ACACGGAGAG TAGTGGTTCA AACTCCAATT CAAGTTCTTG A
|
|---|
| Protein sequence | MSQTPQIQLD IRQGGVQKAL PYTPVANYAI ITDLNKCFGC AGCQMSCKEW NTSGMFGPLP
DLDPYGNLDV MFWLRVLYVE VGNYPQTKVY NIPINCFHCM NAPCVEVCPV GATFKRTQDG
IVLVDYEECI GTKYCIYACP YGNRFFDYVE GVTKKCTHCF DRIYDPTLPP EERIPACIHG
CMVQARIWAN RLDPTDPGNI LFVDKGGFVL GPETGANPAS GYLPWHSAYA ADNDVELLSE
SQYYNVWTSN GVVQLGAQGN NSTYTESSGS NSNSSS
|
|---|
| |