Gene Msed_0767 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0767 
Symbol 
ID5103456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp701339 
End bp701743 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content43% 
IMG OID640506672 
Productferric uptake regulator family protein 
Protein accessionYP_001190866 
Protein GI146303550 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0735] Fe2+/Zn2+ uptake regulation proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.531572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0222977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATCG ATATAGCTGA AATGCTGAGG AAAAGGGGTT TAAAGGTAAC CCCCCAAAGG 
ATAGCTGTCA TAAAGACAAT GATAAGGGGT GGGCATTTTA GTGGGGAACA GATTTTCAGC
GAACTGAAAA AGACTGAACC CAGTATTAGC CTTTCCACCG TCTATAATGC CCTTGAGACT
TTGGAGAAAG CTGGAATCAT AAGATCCTTT GAGGCTGGAG GGAAAACATG GTACGAAATG
CGAATGGAAC CTCACGTTAA CGTGTTCTGC GAGGATCTGG GCGACATAGT GGACGTGGAT
TTAGATCTAG GATCACTCGA GAAGAACCTT GAAGAAAAGG GCATTCAACC GAAAAATTTG
AGCGTGATAG TCTATGCTGA GTGCTCTAAA ATGAAGAAAG TATAG
 
Protein sequence
MEIDIAEMLR KRGLKVTPQR IAVIKTMIRG GHFSGEQIFS ELKKTEPSIS LSTVYNALET 
LEKAGIIRSF EAGGKTWYEM RMEPHVNVFC EDLGDIVDVD LDLGSLEKNL EEKGIQPKNL
SVIVYAECSK MKKV