Gene Msed_0687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0687 
Symbol 
ID5105293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp627777 
End bp628766 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content49% 
IMG OID640506591 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001190786 
Protein GI146303470 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000330964 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000300742 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAAGGTGG CCGTGGTAGG AGGGGGCCCG GCTGGAATAT CACTGGGATG GTTCTTAAGG 
GGAACCAAGA TTGACGTCAC GGTTTATGAA GGACTGGATG ATGTGGGGAA GAAACCATGT
GCGTGGGGAG TTCTCAAGGG GATAGAGAAC TACTTGGACA TCCCAAAGGA GGCAATCTAC
AGTGAGATAA AGGGGTTCAG GATCTACCTA GACAACAAGC TCATCTCAGA GGTTAGGGAG
AGGGAGAGGC TTGGGTATAT CGTGGATAAG CCACTCCTAC TAAGGAAACT GGGGGAGAAG
ATTGATCTGA GACTTAACTC CAAGGTAGTC CTGAACAAGG GCAAGCTCGT GGTGAACGGG
AAGGAGGAGG AGGCTGACAA GGTGATAATT GCCACTGGCC ACTATTCCCT CTCCAAGGAT
GTCACAATTC CCGCACTCCA ATACATTACT GACCTAAATT ACGATCCAGA AATGGTGGAC
ATGTACTTCT ACTCTGACCT CCTTGGATAT GGATGGATAT TCCCTGATCC AAAGGGGGCT
AAGATTGGGG TAGGGGGTTA TGCTTCCGTG GACTTCATAA GGGAGAAACT AAAGACCATC
ACGTCAGGTA GGATCATAAC CCAACATGGA GCGAGAGTCG CTGACTACGG AGTTTTCGAG
GATAGATTGA ACGGCTCATA CATTGGCGAG GCCTTGGGAA CAGTGTACGC GGTCACGGGG
GAGGGGATAA GGCCATCAAT CATCTCCTCA AGGATTATGG CAGACTCCCT CTTGGAGGGG
AAGGACTTCT CTAGGGAGTT CAAGAGGAGC AAGCTTCACT GGACCCTTCA GGTGCACGCG
GAAGTGATAA AGAGAGCTAA GGCATCCAAC TCGGTAAAAG GATTGGAGAG GGTATTACTA
AGGGCAGATC CAAAACTGGT TGTGAAGTTC GCCATGGGCG ATTTCGGAAA GTTAGACCTT
ATTAAACTGT TCGGGAGTGC TATATTATGA
 
Protein sequence
MKVAVVGGGP AGISLGWFLR GTKIDVTVYE GLDDVGKKPC AWGVLKGIEN YLDIPKEAIY 
SEIKGFRIYL DNKLISEVRE RERLGYIVDK PLLLRKLGEK IDLRLNSKVV LNKGKLVVNG
KEEEADKVII ATGHYSLSKD VTIPALQYIT DLNYDPEMVD MYFYSDLLGY GWIFPDPKGA
KIGVGGYASV DFIREKLKTI TSGRIITQHG ARVADYGVFE DRLNGSYIGE ALGTVYAVTG
EGIRPSIISS RIMADSLLEG KDFSREFKRS KLHWTLQVHA EVIKRAKASN SVKGLERVLL
RADPKLVVKF AMGDFGKLDL IKLFGSAIL