| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0641 |
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| Symbol | |
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| ID | 5103801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 587478 |
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| End bp | 587984 |
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| Gene Length | 507 bp |
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| Protein Length | 168 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640506545 |
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| Product | ZPR1-related zinc finger protein |
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| Protein accession | YP_001190740 |
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| Protein GI | 146303424 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1779] C4-type Zn-finger protein |
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| TIGRFAM ID | [TIGR00310] ZPR1 zinc finger domain
[TIGR00340] ZPR1-related zinc finger protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.205749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.261056 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGCCCG AGCTAGTCAT GGACCAGGTG TTCAAGTGTC CTGTTTGTAA GAAGGATACC
TTTCAAGCTA AGGATTACGT GTATGACACG CCAACAGGTA AGTTACTTCT CTCGTACTGG
GAATGCACAG ATTGTCATTA CCTATACAGG GACGTTAAGC CCTACGAGAC TGGAGTCCCC
GTGGAAATCA CGCTCCTTGT GACCTCGGAG GACGACCTCT CATCCCTAGT GTATAGGTCA
GCCTTTGCCG AACTCTATAT TCCAGAGCTG GGAGTTGAGG TTATTCCTGG CTCGTCCTAT
CAGGGGGCTG TATCCACGAT CAGAGGTCTT CTGGAAATAA TAATGGATAA CATGGGGTCT
CTTTGCAAGA ACAAGAAATG TGACAAGATC AGGCAGGCAA TGGATGGAAA AATACAGTTT
ACAGTAATTA TCAAGGATTC CTCTGGAACG AGTTTCATAA AAAATGACAA GGCTAAGGTT
ACTCGACCTT TATATCCTTC CCAGTAG
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| Protein sequence | MEPELVMDQV FKCPVCKKDT FQAKDYVYDT PTGKLLLSYW ECTDCHYLYR DVKPYETGVP
VEITLLVTSE DDLSSLVYRS AFAELYIPEL GVEVIPGSSY QGAVSTIRGL LEIIMDNMGS
LCKNKKCDKI RQAMDGKIQF TVIIKDSSGT SFIKNDKAKV TRPLYPSQ
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