| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0632 |
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| Symbol | |
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| ID | 5103792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 577891 |
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| End bp | 578862 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640506536 |
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| Product | thioredoxin reductase (NADPH) |
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| Protein accession | YP_001190731 |
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| Protein GI | 146303415 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0492] Thioredoxin reductase |
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| TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00998267 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.636604 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTCTCA TTCCACGCTC AACGAATATT AACCCAAACG AGAAATTTGA TACCATCATT
ATTGGTCTTG GTCCAGCAGC CTACAGTGCT GCACTATACG CAGCTAGGTA CATGCTAAAG
ACGCTTGTAA TAGGGGAGAC GCCAGGAGGT CAGCTAACTG AGGCAGGAGA AGTGGATGAC
TACCTGGGCC TCATTGGCGT TCAAGCGTCG GAAATGATAA AGTTATTCAA CGCTCATGTA
GAGAAATACA AGGTACCTGT TCTCATGGAC AGGGTAGAGT CCTTTAAAAG AGAGGGCGAG
GAATATGTGG TCAAGACCAA GAGAAAGGGA GAGTTTAGGG CTTCTACACT AATAGTAGCA
GTGGGAACCA AGAGGAGGAA ACTTAATGTT CCAGGTGAGA ACGAGTTTAT AGGTAGGGGT
GTCTCCTACT GCTCCGTGTG TGACGCCCCA CTCTTCAAGA ATAGGCCAGT AGTTGTAGTG
GGGGGAGGAA ACTCGGCGTT GGACGGGGCC GAGCTACTTA GCAGGTACGC GACCAAGGTT
TACCTTGTGC ATAGAAGGGA AGAGTTTAGG GCTCAACCAA TAATAGTGAA ACTGGTTAAG
GAGAAACCAA ATGTGGAGTT GATCCTGAAC TCCGTGGTCA AGGAAATTAA GGGAGATAAG
CTTGTCAGGA AAGTTGTGGT ACAGAATATG AAAACCGGCG AGGTAAGGGA GATAGATGCC
AATGGAATAT TCGTGGAAAT AGGATTTGAA CCCCCCACTG AGTTCGCTAA GATTAACGGA
CTAGAGGTGG ACGAACAGGG TTACATAAAG GTAGACGACT GGACAAGGAC TAACCTACCA
GGGGTTTTCG CTGCAGGGGA CTGCACCAAC AAGTGGATTG GATTCAGACA GGTTGCAACG
TCAACAGCAA TGGGCGCGGT TGCGGCACAC TCAGCTTATA ACTATTTGAA CGAGAGAAAA
GGTAAAACAT GA
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| Protein sequence | MSLIPRSTNI NPNEKFDTII IGLGPAAYSA ALYAARYMLK TLVIGETPGG QLTEAGEVDD
YLGLIGVQAS EMIKLFNAHV EKYKVPVLMD RVESFKREGE EYVVKTKRKG EFRASTLIVA
VGTKRRKLNV PGENEFIGRG VSYCSVCDAP LFKNRPVVVV GGGNSALDGA ELLSRYATKV
YLVHRREEFR AQPIIVKLVK EKPNVELILN SVVKEIKGDK LVRKVVVQNM KTGEVREIDA
NGIFVEIGFE PPTEFAKING LEVDEQGYIK VDDWTRTNLP GVFAAGDCTN KWIGFRQVAT
STAMGAVAAH SAYNYLNERK GKT
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