| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0581 |
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| Symbol | |
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| ID | 5103741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 535362 |
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| End bp | 535985 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640506485 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001190680 |
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| Protein GI | 146303364 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.696178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.657435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGGCAA TGATACTTGA CCTTGACGGA ACTCTCGCCA CAACAGCCCT TCTTCACAAG
GAAGCTTGGG AACTGGCCAT GAAAAGGTTG GGAATTAACG CAAACGTAAA TCTTGATCTG
CTCATGGGAA AGAGGACTCT GGACATAGCG AAAACTCTAG CTGGTGAAAG GTACCAGGAG
CTTTTCGAGG TTAAAAATGA CATATTTGAT GAGCTGGTAG CAAGGAAGGC GATGCCTTTG
CCCTGTGCTA GGGAGATGGT TGAAAGGGCA AGATCAAAGG GATATTCCAT AGCTGTGGTT
ACCTCGTCAC TGAGAAGGTC AGCCTCTAAG AGTTTAGGGG CTATAGGCGT GACCCCAGAT
TTACTAATAG CTGGGGACGA CGTGGAAAAG GGCAAGCCCG ATCCCTTCCC AGTTGTTTTG
GCACTCCAAA GGCTTAGAGC ATTGCCTGAG GTTAGCGTGG GAGTAGGTGA TACACTTCAC
GATTTTCACG CGTTTAAGGG AGCAGGTCTT GGTAGGATCT TCATTCTGAA GGGAGAGTTG
GGCTTGGATC TGTCTTGGAT AGCGAGTCAG GGAGCCGCTC TTGTGGATAG TCCCTGCAAC
GTGATTAAAG CCCTTGATTT GTGA
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| Protein sequence | MKAMILDLDG TLATTALLHK EAWELAMKRL GINANVNLDL LMGKRTLDIA KTLAGERYQE
LFEVKNDIFD ELVARKAMPL PCAREMVERA RSKGYSIAVV TSSLRRSASK SLGAIGVTPD
LLIAGDDVEK GKPDPFPVVL ALQRLRALPE VSVGVGDTLH DFHAFKGAGL GRIFILKGEL
GLDLSWIASQ GAALVDSPCN VIKALDL
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