Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0558 |
Symbol | |
ID | 5103718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 512978 |
End bp | 514054 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640506462 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_001190657 |
Protein GI | 146303341 |
COG category | [C] Energy production and conversion |
COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAACTA TGAGTAAAGT AGTCATTGTA GGAGGAGGCA ATGGCGGGCT CGTGGTGGCC AATAGGCTTC ACGGGAAGGG ACTGGACGTG ACTGTCGTTG AGCCTTCTGA TACCCACCTC TATCAACCAG GTATTGTGGA TTATGTCCTG GGACATGAAA GGGAAGAGTC CATAGTGAAG AGTCTAGACT CTCTGTTACC GGTTAAGTGG GTGAAGGGAA GAGCTACTAA GGTAGTGGTT GAGGATCATT ACGTCATGGT TGGGGACAAG AGATTGGACT ACGATTACCT AGTACTGTCT CCCGGTGCAG TGAGCAAGAA GATTGAGGGA ACCATGGGTT GGCATACCCT AGAGGAGGGA AAGAAGCTCA GGGAATTGGT GAACGCGTTC ACGGGGAACT CCATAGTTGT GGGGTATTCG GGTGTTATTA AGTGTCCTGC TGCCCCCTTT GAGTTTGCCT TCCTTCTCAA GGAGAAGTTC CCTAAGGCCA AGGTGACTCT GCTTAACCCT GTCTCCAATC CGCCAGAGAT CCAGAGGCCC ATGTCAGAGG CTTTTGGAAG GAGGGCCAAG GAACTAGGGA TCGAGATCAA GAGAGGCTTC AGGATAGCCA AGGTAGATGA GAAGCAGAAA GTGATAGAAT CTGAAAGCGG AGAGAAAGTC CAGTACGACC TGGCATTGAT TGATCCTCCA GTCACTGTGG GTAACGAGTT CAAGGAGATG ACGGATCAAA GCGGTTTCAT TCCAGTGGAT AGAACCAGCC TAAGGTACAA GAATTACGAT AACGTGTTCG TGATAGGTGA CGCCAATAAT ATAATGACAC CGCCCAAGAC AGGCTCCAAG GCGCATTATG AGGCTAAAGT TGTGTCGGAT AACATCATTT CCATGACACA GGCAGGTAGC AGAAAGGTAT ATGATGGAAG CGCAATCTGT GCTGTCTACG CAAGTTCAAA GAAAGGATAT CTGGTCAGGA TGAACTTTGA GAAAAGTTCA ATTTATGGAG CGTCTTCATT ATTTTACGAA ATGAAGAAAG CATTCACCCA CCTGTATTGG ACTTCATTGA AGGGGACATT TCCGTGA
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Protein sequence | MLTMSKVVIV GGGNGGLVVA NRLHGKGLDV TVVEPSDTHL YQPGIVDYVL GHEREESIVK SLDSLLPVKW VKGRATKVVV EDHYVMVGDK RLDYDYLVLS PGAVSKKIEG TMGWHTLEEG KKLRELVNAF TGNSIVVGYS GVIKCPAAPF EFAFLLKEKF PKAKVTLLNP VSNPPEIQRP MSEAFGRRAK ELGIEIKRGF RIAKVDEKQK VIESESGEKV QYDLALIDPP VTVGNEFKEM TDQSGFIPVD RTSLRYKNYD NVFVIGDANN IMTPPKTGSK AHYEAKVVSD NIISMTQAGS RKVYDGSAIC AVYASSKKGY LVRMNFEKSS IYGASSLFYE MKKAFTHLYW TSLKGTFP
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