| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0493 |
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| Symbol | |
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| ID | 5103655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 449008 |
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| End bp | 450183 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640506399 |
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| Product | amidohydrolase |
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| Protein accession | YP_001190594 |
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| Protein GI | 146303278 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.642244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCTC AAAGGATTTA CAACGAAGCG AGGGAAATAG AGGATAAGGT AATAGAGTTA
AGAAGGAAGA TACACGAAAA TCCAGAACTC TCATACCAGG AGTATGAGAC TGCGAAGTTA
GTCGCCAACT ACCTGAGGTC TCTTGGGATA GACGTCAGGG AAGGGGTAGG GACCGAGACA
GGGGTCCTCG GCGTCATCAA GGGAAGGAGA AGCGGAACAG TTGCCCTAAG GGCAGACATG
GACGCCCTCC CCGTGACCGA GGAGACAGGT CTACCCTTCG CCTCAAAGAA ACCAGGAGTT
ATGCATGCAT GTGGTCACGA TGCCCACACT GCCATGCTCC TCGGTGCAGC CACAATACTC
TCACGTCACC TTGACGAGAT CGGAGAGGTT AGACTCATCT TCCAGCCGGC AGAGGAGGAT
GGAGGAAGGG GTGGTGCGCT TCCCATGATA GAGGCCGGAG TAATGGAAGG CGTTGACTAT
GTTTTCGGGT TACATGTGAT GTCGGGCTAT CCCTCAGGCA CCTTGGCAAC GCGTGGAGGG
GCTATAATGG CCTGTCCCGA TTCCTTCAGG GTTGAGGTAG TGGGAAGAGG AGGTCATGGA
TCTGCTCCTC ATGAGACAAT TGACCCAGTC TTCATCTCCG CCATGATAGT TAACGCGTTG
CAGGGCATAA GGTCGAGGCA GATCAATCCC CTTGAACCCT TTGTCCTTTC CGTGACCAGT
ATCCATTCTG GTACTAAGGA CAACATAATA CCTGACAGGG CGGTGATGGA GGGAACAATC
AGGACCCTAA ACGAGAAGGT GAGAGAGACG GCACTTAAGT CCTTCAGAAA CATTGTGAAA
TCGGTGTGTG AGGCATACGG AGCCGAGTGC TTGGTTCAGT TCAAGGAGGA CGCATACCCT
GTCACCGTGA ACGATCCCGA TACCACAAAG AGAGCCATGG AAATACTCAA GGATATTCCT
GGGGCAGAGG TGAAGGAAAC GCAACCTGTG ATGGGTGGAG AGGACTTCTC GCGTTTTCTG
CAAAGGGCTA AGGGATCTTT CATCTTCCTC GGAACCAGAA ATGAGAAGAA GGGAATAGTC
TATCCTAACC ATAGCTCTAA GTTCACAGTG GATGAGGATG CCCTAAAGGT TGGGGTAACT
GCGTTAGCAC TTCTGGCAAG TAAGTTCTCG TCATGA
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| Protein sequence | MDAQRIYNEA REIEDKVIEL RRKIHENPEL SYQEYETAKL VANYLRSLGI DVREGVGTET
GVLGVIKGRR SGTVALRADM DALPVTEETG LPFASKKPGV MHACGHDAHT AMLLGAATIL
SRHLDEIGEV RLIFQPAEED GGRGGALPMI EAGVMEGVDY VFGLHVMSGY PSGTLATRGG
AIMACPDSFR VEVVGRGGHG SAPHETIDPV FISAMIVNAL QGIRSRQINP LEPFVLSVTS
IHSGTKDNII PDRAVMEGTI RTLNEKVRET ALKSFRNIVK SVCEAYGAEC LVQFKEDAYP
VTVNDPDTTK RAMEILKDIP GAEVKETQPV MGGEDFSRFL QRAKGSFIFL GTRNEKKGIV
YPNHSSKFTV DEDALKVGVT ALALLASKFS S
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