| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0490 |
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| Symbol | |
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| ID | 5103652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 445778 |
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| End bp | 448012 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640506396 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_001190591 |
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| Protein GI | 146303275 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCACTG AGGAGAAGTC CTCACTTAGA CTGAGGAAGG AAGAGGAACT CAAAATCCTG
GGAATGCACT GTGCAACATG CGAGGTAACC GTAACCAAGG CGATTTCTGG AGTTAAGGGA
GTTCAAGAGG CTAGGGTTAA CCTGGCTTCT GGAAATGCTA AAGTTATACT GCAGGGGGGC
AGGCTCAAGG AAGTTGTTGA CGCTGTCAGG AAGGCTGGAT ATGACGTTGT CCTTCAGAAA
TTCACAGCGA AGGTTAGGGT AAGCGAGGAG GAGTCCCACA GGTTAACAGA GATTCTAGAG
GGGATGGACG GAGTAGTCTC TGCCAAGATA AATCCCTCCT CAGGGCTAAT CATTGTGGAG
TACAACCCCG TGACTGCGTC GTCCGACAGG ATCAGGGAGG AACTGGAGAG ACGCGGTTAC
AGGATAGAAA TCGAGGAGGA GAGACTATCC AGATCAAGCG ATTTCAAGGA CCTTTTGACT
CGCCTAATCG TGGGGGCTCT CATCTCCCCC TTTACGTTGA TCAGCATTCC TATTCTCCAA
TTCATTCTTT CAATTCCTGT GGTCTTCTTT GCGGGAATGA GGTTCCACAC TGGTGCCTAC
AGGGCACTCA GGAATAGGAC GACGAACATG GACGTCCTCG TTTCGCTGTC GTCCTTAACG
GCGTGGGTTT ATAGTCTAGT GTCCCTCCTG TACCTTCACG CGGGATACTT CTTCGACTCG
GCCTCCCTCC TGGTAACCTT CATCCTTGCT GGGAAGACCC TCGAGGCATA CATCAAGGAA
AGGACCAGCA ACGATGTTGT TAGTCTCCAG TCAGTGAAGG CCACAAAGGC CAACGGGGAG
ACAGTGGACT CGAGGAAATT GAGGGTTGGT GACGTGGTCG TGGTAAAGGG AGGGGAGGTG
GTTCCAGCAG ATGGCATTGT GGATGAGGGA GAGGGATACG TAAACGAGTC CATTTACACG
GGAGAACCTC TGCCGGCAAA AAAGAAGAAG GGCGATTCAG TGATAGGGGG ATCCACTCTC
GTCTCGGGTT TCCTCAAGAT TTACGTTACC AGGACTGGGG AGAGAACCTA CATATCTCAG
GTTATCGAGG CATTGAGGGA GGCAGAGGCC GTGAGGATAC CGATACAAGG TTTGGCGGAC
AGGATATCCG CAGTCTTTGT TCCCACAGTG ATTGTGGTAG CCTTAATCTC CTTTGCGGTG
TGGTTTTACG CATTACATCA AACCCTAACG TTCTCTATCC TGATCGCGGT TGCGGTTCTG
GCATCCGCCT GCCCTTGTGG CTTTGGCTTA GCTACTCCCA TGGCTGTCAT GGTCGGGATT
AGGAAACTCC TAAGGAGAGG GATAGTGGTG AAGAGGGGCG AGAGCCTGGA GAAACTCGGT
GACGTTAAGA CGTTTGTATT GGACAAAACA GGGACAATTA CACGGGGAGA GATCAAGGTG
GAGAGATTTC AGGAGTACGT GCCAGGTGCA GTTGAGTTAG CTTCGTCCCT GGAGAGACTT
AGTAATCATC CCGTGGGAAG AGCCATAGCT TCGCTCTCTA GTTCATCTCA CGGCGTGGAA
GGATTCACTG AGATGGATGG CGGAGTTTAC GGGAAGGTAG ATCAACATGA GGTTCTGGTT
GGTAAGCCCG ATCTCGTTAA GAGGAACTGT GAAGGTGAGC CTCGCGGAGA TGTCAGCGTA
TGCGTAGACT GGAAAGTGGC GGGAGATTTC TGGCTAAATG ACGAAATGAG GGAGGGGGTC
AAGGAGGTAG TTGAGGAACT AAAGGGGAGA TTCGGGGTAA TCATTGCCAC AGGGGATTCT
AGCGAGTACG CTGATAGGAT TGCGTCGGAG CTAAGAGTAG AGCTGAGAAA GGGACTAACC
CCTGAGGATA AGGTAGAGCT AGTGAGGCAA CTTAAGAGGG AGGGAGGTGT GGCATTTGTA
GGAGATGGAG TCAATGACGC CCAAGCCTTG AAGGAGGCAG ACGTGGGAAT TGCGGTGTCT
AGCGGGACGG ACCTAGCAAA ATACGCCGGA GACGTAGTTA TACCTGGGTT GAACGCTTTG
CCTTTTCTCA TAAGGCAGTC CCACAGGACA GTTAGGAAGA TCAAGGAGAA CATTGCGTGG
TCCCTTACCT ACAACGCGGT GTTGGTGCCC ATAGCTGCAG GAATGCTTTA TCCCATAGTT
CTACCACCCG AGTACGCAGC CCTAGGAATG GCCATGAACA GCGTGAGCGT TGCCCTCTGG
AGTTTCGTCC AGTAA
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| Protein sequence | MGTEEKSSLR LRKEEELKIL GMHCATCEVT VTKAISGVKG VQEARVNLAS GNAKVILQGG
RLKEVVDAVR KAGYDVVLQK FTAKVRVSEE ESHRLTEILE GMDGVVSAKI NPSSGLIIVE
YNPVTASSDR IREELERRGY RIEIEEERLS RSSDFKDLLT RLIVGALISP FTLISIPILQ
FILSIPVVFF AGMRFHTGAY RALRNRTTNM DVLVSLSSLT AWVYSLVSLL YLHAGYFFDS
ASLLVTFILA GKTLEAYIKE RTSNDVVSLQ SVKATKANGE TVDSRKLRVG DVVVVKGGEV
VPADGIVDEG EGYVNESIYT GEPLPAKKKK GDSVIGGSTL VSGFLKIYVT RTGERTYISQ
VIEALREAEA VRIPIQGLAD RISAVFVPTV IVVALISFAV WFYALHQTLT FSILIAVAVL
ASACPCGFGL ATPMAVMVGI RKLLRRGIVV KRGESLEKLG DVKTFVLDKT GTITRGEIKV
ERFQEYVPGA VELASSLERL SNHPVGRAIA SLSSSSHGVE GFTEMDGGVY GKVDQHEVLV
GKPDLVKRNC EGEPRGDVSV CVDWKVAGDF WLNDEMREGV KEVVEELKGR FGVIIATGDS
SEYADRIASE LRVELRKGLT PEDKVELVRQ LKREGGVAFV GDGVNDAQAL KEADVGIAVS
SGTDLAKYAG DVVIPGLNAL PFLIRQSHRT VRKIKENIAW SLTYNAVLVP IAAGMLYPIV
LPPEYAALGM AMNSVSVALW SFVQ
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