| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0394 |
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| Symbol | |
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| ID | 5103637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 341742 |
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| End bp | 343391 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640506300 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001190495 |
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| Protein GI | 146303179 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGGAT TCAAAATACC CAACTACGAG GGGGTAGATC CAACAGGTTC TTGGTACTCG
GTTCTAACTC CTCTCCTCTT CCTTGAGAGA GCTGGCAAAT ACTTCAAGGA CAAGACGGCA
GTTGTTTACA GGGACAGTAG ATACACCTAT TCCACCTTCT ACGACAACGT CATGGTTCAG
GCCAGTGCCC TGATGAGGAG AGGGTTCTCG AGGGAAGACA AACTTTCCTT CATTTCACGG
AACAGGCCTG AGTTCCTTGA GTCGTTCTTT GGGGTTCCAT ACGCGGGTGG AGTTCTAGTC
CCCATCAATT TCAGGCTCTC ACCTAAGGAG ATGGCCTACA TTATCAACCA TTCCGACTCC
AAGTTCGTTG TGGTGGACGA GCCGTACTTG AACTCACTGC TGGAGGTAAA GGACCAGATT
AAGGCTGAGA TCATCCTCCT GGAGGACCCA GACAATCCCA GTGCCAGCGA GACAGCCCGG
AAAGAGGTGA GGATGACCTA TCGCGAGCTA GTGAAGGGAG GGTCGAGGGA TCCTCTCCCT
ATCCCAGCGA AGGAGGAATA CTCCATGATA ACGCTTTACT ACACCTCAGG GACTACGGGT
CTGCCCAAGG GGGTGATGCA TCATCACAGG GGTGCCTTCC TTAACGCCAT GGCCGAGGTA
CTGGAACACC AGATGGACCT CAACTCGGTT TACCTCTGGA CCCTCCCAAT GTTCCATGCT
GCGTCCTGGG GTTTCTCTTG GGCCACAGTT GCTGTGGGAG CAACCAACGT GTGCCTGGAC
AAGGTAGATT ACCCCTTGAT ATACAGGCTC GTGGAGAAGG AGAGGGTCAC TCACATGTGC
GCTGCCCCAA CGGTTTATGT GAACCTAGCA GATTACATGA AACGTAACAA CCTTAAGTTC
AGTAACAGGG TCCACATGTT AGTGGCAGGC GCAGCTCCCG CCCCGGCTAC CTTGAAGGCA
ATGCAGGAGA TTGGCGGTTA CATGTGTCAC GTGTATGGGC TTACCGAGAC CTACGGGCCC
CACTCCATCT GTGAGTGGAG AAGGGAATGG GACTCGCTTC CCCTGGAGGA ACAGGCCAAG
CTCAAGGCAA GACAGGGCAT ACCATATGTA AGCTTTGAGA TGGACGTGTT TGATGCTAAC
GGCAAACCTG TTCCATGGGA TGGGAAGACC ATTGGCGAGG TAGTAATGAG GGGTCATAAC
GTAGCTCTTG GGTATTATAA GAACCCCGAG AAGACCGCGG AGTCTTTCAG GGATGGGTGG
TTCCACTCAG GAGACGCTGC CGTGGTTCAC CCAGACGGTT ATATCGAGAT AGTGGATAGG
TTCAAGGACC TGATCAACAC AGGAGGCGAG AAGGTTTCCA GCATTCTCGT GGAGAAAACT
CTCATGGAGA TCCCTGGCGT GAAGGCAGTA GCCGTGTATG GTACTCCAGA CGAGAAATGG
GGAGAAGTGG TAACTGCGAG GATAGAATTA CAGGAAGGAG TCAAGCTCAC GGAGGAGGAG
GTGATAAAGT TCTGCAAGGA GAGATTAGCT CACTTCGAGT GTCCCAAGAT TGTGGAGTTC
GGTCCCATAC CCATGACCGC CACGGGTAAG ATGCAGAAGT ACGTGCTCAG GAACGAGGCT
AAGGCCAAGG CAAACAAGGA GAAGTCTTAG
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| Protein sequence | MGGFKIPNYE GVDPTGSWYS VLTPLLFLER AGKYFKDKTA VVYRDSRYTY STFYDNVMVQ
ASALMRRGFS REDKLSFISR NRPEFLESFF GVPYAGGVLV PINFRLSPKE MAYIINHSDS
KFVVVDEPYL NSLLEVKDQI KAEIILLEDP DNPSASETAR KEVRMTYREL VKGGSRDPLP
IPAKEEYSMI TLYYTSGTTG LPKGVMHHHR GAFLNAMAEV LEHQMDLNSV YLWTLPMFHA
ASWGFSWATV AVGATNVCLD KVDYPLIYRL VEKERVTHMC AAPTVYVNLA DYMKRNNLKF
SNRVHMLVAG AAPAPATLKA MQEIGGYMCH VYGLTETYGP HSICEWRREW DSLPLEEQAK
LKARQGIPYV SFEMDVFDAN GKPVPWDGKT IGEVVMRGHN VALGYYKNPE KTAESFRDGW
FHSGDAAVVH PDGYIEIVDR FKDLINTGGE KVSSILVEKT LMEIPGVKAV AVYGTPDEKW
GEVVTARIEL QEGVKLTEEE VIKFCKERLA HFECPKIVEF GPIPMTATGK MQKYVLRNEA
KAKANKEKS
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