Gene Msed_0363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0363 
Symbol 
ID5103606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp316669 
End bp317217 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content47% 
IMG OID640506269 
ProductTQO small subunit DoxD 
Protein accessionYP_001190464 
Protein GI146303148 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAGA AACAGGGTTT GAATCCCGGA AATTCAACGA GGATGGAGTA CTTGTTCCCT 
ATCAGGTTCG CAGTGGGATG GATGTTTCTC GATGGAGGAC TTAGGAAGGC CGTGCTAAAG
CCAGCTAAGT TGGATCCGAA CTCCTCCTCC TTCGTTGGAG GGAAGTTAGT AAACTTCCTG
CCACATGCAG GTCCCTTCAA GCCCTTTCTT TTAATGACAT TGGAGAATAG GGGACTCGAC
GTTACGTTCC TAACAGCATT TAGCTACATA GAGATAATTG CTGGGCTATT TCTTGTGATA
GGATTCTTAA CTAGGTTATC AGCTCTAGCT GCGCTCTTCA TGTCAGTGGG TTTCGCACCA
GCTTACTGGT TAGGATCCAC TTGTGAAGAT GAATGGCAAA TAGGTGCTCT TCTCACAGCA
GGTTCCGTAG TGCTAATGCT TACTGCTACG GGTAGGGTAT TCGGGTTAGA TAGCGTCCTT
TACAAGAAGT TTGGCGACAG GCCTCTTTCC AAGAGGATTC CCATACTCAA CATGATAAAG
CTGTGGTGA
 
Protein sequence
MAEKQGLNPG NSTRMEYLFP IRFAVGWMFL DGGLRKAVLK PAKLDPNSSS FVGGKLVNFL 
PHAGPFKPFL LMTLENRGLD VTFLTAFSYI EIIAGLFLVI GFLTRLSALA ALFMSVGFAP
AYWLGSTCED EWQIGALLTA GSVVLMLTAT GRVFGLDSVL YKKFGDRPLS KRIPILNMIK
LW