Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0296 |
Symbol | |
ID | 5104932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 252715 |
End bp | 253146 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640506202 |
Product | rubrerythrin |
Protein accession | YP_001190397 |
Protein GI | 146303081 |
COG category | [C] Energy production and conversion |
COG ID | [COG1592] Rubrerythrin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.585668 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAGCC TAAAGGGAAC TAAAACAGAG GAAAACTTTA AACATGGTTT CATGGGCGAA TCCATGGCAA ACAGAAGGTA CCTATACTTC GCTAAGAGAG CAGACGAGGA GGGATACCCC GAGCTAGCTC AACTCTTAAG GAGCATCGCT GAAGGTGAGA CAGCACACGC TTTCGGACAC CTAGATTTCA TAAGACAGGG AGGATCAGTG GACCCGGCCA CTGACAAACC CATAGGCACA ATAGAGCAGA TGCTGGAGTC TGCCATAGCG GGAGAGACCT ACGAGTGGAC CCAAATGTAT CCAGGCTTCG CCAAGACAGC TAGGGAAGAG GGATTTGACG AGGCTGCAGA GTGGTTTGAA ACCCTAGCCA GGGCTGAGAA GAGCCACGCT GAAAAGTTCA CAAACGCTCT CAAGATGTTG AAAGGGAGCT AA
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Protein sequence | MKSLKGTKTE ENFKHGFMGE SMANRRYLYF AKRADEEGYP ELAQLLRSIA EGETAHAFGH LDFIRQGGSV DPATDKPIGT IEQMLESAIA GETYEWTQMY PGFAKTAREE GFDEAAEWFE TLARAEKSHA EKFTNALKML KGS
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