| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0269 |
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| Symbol | |
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| ID | 5103889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 226793 |
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| End bp | 227290 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640506175 |
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| Product | hypothetical protein |
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| Protein accession | YP_001190370 |
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| Protein GI | 146303054 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.000709024 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.121609 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCATC CACTTAAGGA GGAGGAATTG AAGGAACACG TTACCATTTC GTACAAACCT
CAGGCCAAGT ATTCCTACAC TGCGGGCCAG GCTCTGAGCA CTTTCCTCAG GGGGCTGAGG
GAGGGGAAGA TCCTGGGAAG GAAATGTCCG AGGTGCGGAA GGGTTTACGT ACCGCCGAGA
ATGTACTGCG AGGATTGTTT CTATCCCACT TCGCAATGGG TTGAGGTCAA GGATGAGGGA
GTTGTTATGA CCGCCGTGGC AAGCTTCATT TCATGGACAA GGGACAGACT AGAGGAGCCA
GAAATTGTGG GAACCATTAG ACTATTCCCG TCATCTCCCA GGGATTACGT ATATCCAGGT
CTGTTCCACA GAATATGCTG TTCCTACGAA GACGTGAAGA GCATGACAAT TATGGGAAAA
ACTGTGAGGG CCAGATGGAG ACCCGCTGAA AAAAGGACAG GAAGCATTGA CGATATAGAG
TGCTTTGAGG TGGTGTAA
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| Protein sequence | MVHPLKEEEL KEHVTISYKP QAKYSYTAGQ ALSTFLRGLR EGKILGRKCP RCGRVYVPPR
MYCEDCFYPT SQWVEVKDEG VVMTAVASFI SWTRDRLEEP EIVGTIRLFP SSPRDYVYPG
LFHRICCSYE DVKSMTIMGK TVRARWRPAE KRTGSIDDIE CFEVV
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