| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0251 |
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| Symbol | |
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| ID | 5103871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 211668 |
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| End bp | 212435 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640506157 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001190352 |
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| Protein GI | 146303036 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.452318 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGACA GACTTTATGC GCTCTATATG AGGGAGGCAA AGAGGATATT CCGAAGCGTG
TATATGTGGA TAATGCTAAT CTCACAGCCC ATAATGTGGC TAGTGTTCTT CGGTAGCAGT
TTCTCTGGTG TACCTTCTCA AGTCCTAATA AGCTTCTTTC ACACTACCAA CTACATAGCC
TTCATTCTAC CCGGTGAGTT ATCCATATCC ATGCTTTTCG TGGGGATGTT CAGCTCCATG
AGCCTTATCC AAGACAAGAG GTTCGGTTAC TTGAAGAGAG TCCTCATTAC CCCGACACCG
AAATACGACG TCTTTCTAGC TAAGACGCTA GGTGGAATGA CAAGGGGATT ATTGCAGGTT
CCAATTCTAC TGGTAGCCAG TTACTTCCTA GGAGTAAGGT TAAATCTTAC TCCACTTTCG
CTCGGAGTCC TGTTCCTATC TCTAGCTTTC GTTGGATTGG GTTTCTCCTC ACTCTATTCC
ATGTTCACCC TAAAGACTGC TGACTGGCAA GCACCCGGAG TTATATCAAA CCTGATAAAT
CTACCTCTCA TGTTCTCTAG TACAGCTCTC TTTCCAAAGG CCTTCTTCCC TGGATGGTTA
AGGGCAATAA GCGACGTTAA CCCTCTCACT TATGCTGCTG AACTTAACAG AGGAATGTTG
CTTTATAATG ACCCATCGTG GAATTACCTG GGATACCTTG CCGTGTTTGC TCTTGTAATG
GTTCTCTTGG GAAGCATATT AACAAATAAG TATCTAAATG CAGAATAA
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| Protein sequence | MIDRLYALYM REAKRIFRSV YMWIMLISQP IMWLVFFGSS FSGVPSQVLI SFFHTTNYIA
FILPGELSIS MLFVGMFSSM SLIQDKRFGY LKRVLITPTP KYDVFLAKTL GGMTRGLLQV
PILLVASYFL GVRLNLTPLS LGVLFLSLAF VGLGFSSLYS MFTLKTADWQ APGVISNLIN
LPLMFSSTAL FPKAFFPGWL RAISDVNPLT YAAELNRGML LYNDPSWNYL GYLAVFALVM
VLLGSILTNK YLNAE
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