| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0239 |
|---|
| Symbol | |
|---|
| ID | 5104105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | - |
|---|
| Start bp | 199880 |
|---|
| End bp | 200266 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640506145 |
|---|
| Product | signal transduction protein |
|---|
| Protein accession | YP_001190340 |
|---|
| Protein GI | 146303024 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.371768 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAGA TCGTCAAAGA CTATATGAAA ACTGAAGTTA TTTCCGTGGA AAAAGGAGCC
ACATTAAGGC AGATAACTAA GATAATGACT GAGAAGAACG TTGGCTCAGT CATTATAACC
GAGAACGGTA AGCCGATTGG CATAGTTACT GAAAGAGATG TAGTCAGGGC CATTGGTAAG
GACCACAAGC TTGACGATAA GGTTGATGAT ATAATGACCG TGTCGCTAAT CACCGTGAGA
GAAGACTCAC CTATTACTGG AGCTCTCAGT CTAATGAGAA CCTATAACAT AAGACACCTC
CCTGTTATTA GTGAGGACGG TAAACTCACT GGTATAATCT CTATTAGGGA CGTAGCTAAA
GCCTTGGATG ACATGTTTGA ATCCTGA
|
|---|
| Protein sequence | MEEIVKDYMK TEVISVEKGA TLRQITKIMT EKNVGSVIIT ENGKPIGIVT ERDVVRAIGK
DHKLDDKVDD IMTVSLITVR EDSPITGALS LMRTYNIRHL PVISEDGKLT GIISIRDVAK
ALDDMFES
|
|---|
| |