| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0224 |
|---|
| Symbol | |
|---|
| ID | 5104090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 186289 |
|---|
| End bp | 186675 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640506129 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001190325 |
|---|
| Protein GI | 146303009 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2835] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.166196 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00859524 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAAATACA GACTAATGGA CATTCTGGCT TGCCCCATGT GCAAACATTT TCACCTGGAT
CTCTACGTGT TCCAGGAGAA GGAGTATCCC AAGAGGGAAC CTAACGGACA GCTTCCCCTC
TGTGAAATTT ACTGTGCCTA TAAGAACACC GAGGTAAAGT CCCTAGAGTC TCCACCTTGT
CAAGAGTGCA TAAAGAAGGA GGTAGTGGAG GGCCTACTGG TGTGCCCGGC GTGTAACAGA
TGGTACCCCA TCATCGACGA GATACCTAGG ATGTTGCCAG ATAAGTTAAG GAAAAGGGAG
AGCGAACTTG AGTTTCTTGA AAAATACAAA TCTAAAATTC CCCAAAAGGT GCTAGAGAGC
GGACTTCCCT TCAATCTCAA GAGTTAA
|
|---|
| Protein sequence | MKYRLMDILA CPMCKHFHLD LYVFQEKEYP KREPNGQLPL CEIYCAYKNT EVKSLESPPC
QECIKKEVVE GLLVCPACNR WYPIIDEIPR MLPDKLRKRE SELEFLEKYK SKIPQKVLES
GLPFNLKS
|
|---|
| |