| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0217 |
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| Symbol | hemC |
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| ID | 5104083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 178945 |
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| End bp | 179817 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640506122 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001190318 |
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| Protein GI | 146303002 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000356603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0285906 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGATAA GGATCGCCGC GAGGGGAAGT AAGCTAAGCC TTAAGCAAGT GGAGATAGTG
ACCACTTATT TACAGGCCAA GGGATATGAA ACGGAGTTCA TCGAAATCAA GACCAAGGCA
GACCTATTTG GAAATAAACC CCTCCATGAG ATAGGCAAGG GCGTTTTTGA GAAGGAAGTC
AATGAGGCGG TTCTTCAGGG AAGGGCGGAT ATAGCTGTAC ACAGCATGAA GGATATGTCA
TCCGAGTTAC CCCCAGGTCT AGAATTGTTG GCAACTCCCA AGAGGGAGAA CCCGGTAGAC
GTTCTAGTCT CTGAGTTAAA CCTTGAGGAA TTGCCAGAGA AATCACGAAT AGGCACAGGG
AGTCTAAGGA GGGCTAATTT CCTTAAGGTC GTGAGACCCG ATCTGGTAGT CGAGAATATA
AGAGGTAATG TGGACACCAG ACTTAGAAAG TATAGGGACC ATGAATATGA TGGAATAATT
TTGGCTGAGG CTGGGTTAAG GAGGCTTGGA GTCGAGGTTA AGAGATTCCC ACTCGACGTA
GAAAGCTTCA CTCCTGAACC CAACCAGGGT ATAATAGCTG TTGTGGGAAG TCCCAAGTTC
CTGGGTCTAT TTCAAGAGCT TAACGATACG GGGACCATGA AGGAGGCTCT AGCAGAGAAG
GAGACGGTAA AAGTAGTTGG GGGTGGGTGT CACTCACCTT TGGGAGTTCT GTTTAGGCTG
GAGGATGACG TGTTACATGG TATAGCGAGT TACAGCAATG GAGTAAAGAG AGTCACCGTT
AAGCTCTCGA CGCGTGAGTC ACCTCAGATT GCCGGTAATC AACTAGGTAA AGCCCTGGTA
AAGGCGATGA AAGATGAGGG TCTTATACCT TAG
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| Protein sequence | MKIRIAARGS KLSLKQVEIV TTYLQAKGYE TEFIEIKTKA DLFGNKPLHE IGKGVFEKEV
NEAVLQGRAD IAVHSMKDMS SELPPGLELL ATPKRENPVD VLVSELNLEE LPEKSRIGTG
SLRRANFLKV VRPDLVVENI RGNVDTRLRK YRDHEYDGII LAEAGLRRLG VEVKRFPLDV
ESFTPEPNQG IIAVVGSPKF LGLFQELNDT GTMKEALAEK ETVKVVGGGC HSPLGVLFRL
EDDVLHGIAS YSNGVKRVTV KLSTRESPQI AGNQLGKALV KAMKDEGLIP
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