| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0114 |
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| Symbol | |
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| ID | 5104967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 94737 |
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| End bp | 96128 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640506013 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_001190215 |
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| Protein GI | 146302899 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000441427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000810769 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCACTTA CTGACGCGCT AGCCAAGTTG GGTCAGGTTC TCCCAGCAGT TACTAAGCCA
GAGGAAAAAC CAACGTTAAA CAAGAAACTG CTATGGTCCA TAGTGGGAGT AGTAGTCTAT
CTATTAATGT CATCTGTTCC CCTTTATGGG ATCCAGAGTA CTGCCCTAAG TAACTTCCTC
TTGGAACAAG TAATATTTGC GTCTACCGCT GGCACGTTAG CCCAGCTTGG AATTGGACCC
ATAATCACTG CCGGACTAAT AATGCAAATA CTTGTTGGAT CTAAACTGCT CAATCTTAAC
TTAAACGATG AAGAAGATAA GGCAAAGTTC ACAGAAGCAC AGAAGGGGTT AGCCTTTCTT
TTCATCTTGT TGGAGTCATT TCTATTTGCA TTTGCATTGA CTAGGTCAAG TGGATTGTCC
AATATCAATA TTCCGTTAAT TGTCGCTGGG CAATTGATTG TTGCAACTTA CCTTATACTA
TTACTGGATG AATTAATTCA GAAAGGTTGG GGACTAGGCT CTGGAGTAAG CTTGTTCATC
CTCGCTGGAA CAATGAAAAT AATATTCTGG TATATGTTCG GAATTGTGAA CGTTCAATCT
CAAAATCTCC CTGTCGGATT CTTCCCGTCG CTCGTCACAA CCATAATCGA TCACGGCAAC
TTACTTAATC TGGTGGTCAA CACGACGAAA TCTTTTCAGC CTGACCTAGT GGGGCTAATT
ACTACAATAG GTCTAATATT TCTAATAATA TATCTGACTT CCATAAATGT TCAAATACCT
ATTACCTCTC AGAAACTAAG GGGAATAAGA AGAACGATTC CGCTCAACTT CCTTTATGTC
AGTAGCATAC CCGTTATATT TGTAAGTGTT CTTGGTGCAG ATATTGAACT TTTCTCTTCC
TTAACCTCTT ATATATCATC CTCTGCTAGC AGTGTTCTAA ACGCAATCCA ATCCGCATTT
ATATTTCCAC CACCTAGCAC CACAATACCT CACAGTGTCT ACGCTGTGGT ACTAGACCCA
GTAGGCGCAG TGATTTATTC TGTAGTTTTC ATCGTGTTAG GTATACTCTT TGGAATAGTA
TGGGTAGAGG TATCTGGTCT TGATCCTGCC ACTCAAGCTC AAAACCTTGT TGATGCTGGG
ATAGAGATCC CTGGCATGAG GAACAATCCA AAGATGATAG AGGCTGTATT GGCCAAGTAT
ATCTATCCTC TAGCCTTCTT TAGTTCCCTA ATAGTCAGTG TGATAGCGGT AGGGGCTACG
CTTTTAGGAG TATACGGAAC TGGTGTTGGA ATACTCTTGG CGGTGTCCAT AGCGATGCAG
TATTACAGTC TATTAGCATA CGAAAGATCT ATAGAGATGT ACCCCTTGTT AAAGAGATTG
ATAGGTGAAT AG
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| Protein sequence | MSLTDALAKL GQVLPAVTKP EEKPTLNKKL LWSIVGVVVY LLMSSVPLYG IQSTALSNFL
LEQVIFASTA GTLAQLGIGP IITAGLIMQI LVGSKLLNLN LNDEEDKAKF TEAQKGLAFL
FILLESFLFA FALTRSSGLS NINIPLIVAG QLIVATYLIL LLDELIQKGW GLGSGVSLFI
LAGTMKIIFW YMFGIVNVQS QNLPVGFFPS LVTTIIDHGN LLNLVVNTTK SFQPDLVGLI
TTIGLIFLII YLTSINVQIP ITSQKLRGIR RTIPLNFLYV SSIPVIFVSV LGADIELFSS
LTSYISSSAS SVLNAIQSAF IFPPPSTTIP HSVYAVVLDP VGAVIYSVVF IVLGILFGIV
WVEVSGLDPA TQAQNLVDAG IEIPGMRNNP KMIEAVLAKY IYPLAFFSSL IVSVIAVGAT
LLGVYGTGVG ILLAVSIAMQ YYSLLAYERS IEMYPLLKRL IGE
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