Gene Msed_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0108 
Symbolrpl32e 
ID5103916 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp91715 
End bp92119 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content37% 
IMG OID640506007 
Product50S ribosomal protein L32e 
Protein accessionYP_001190209 
Protein GI146302893 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1717] Ribosomal protein L32E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000970998 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000353529 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAACGGTA AAACTAGTTT AAGTAGGAAA AAGATATATA AAATGAAATT GAAACATAAG 
GCTCTGTTGC CTAAATTCCT TAGGTATGAT TGGGATAAGT ACTTTAGACT GGAGAGGCAA
GAAAGGTGGA GAAGGACAAG AGGTCAAGAT AATAAAACCA GGCTAAGGAT AAAGGGATTT
CCGAAACCTG TCATGGTAGG CTTTAGGAGC CCTAAGCTCA TTAGATATCT TCATCCTACA
GGTTTGAGGG AAGTTATAGT GAATAACGTC TATGAAGTGG AAGAACTCAA GGAATCAAAG
GACAGAGTTA TTCTAAGGAT TTCTGGAAAA GTCGGTCTTA AGAAAAGGTT AGAAATAATA
AGTAAGGCCA AGGAATTGGG ATTTCGTGTA GCTAATGGTG AGTAA
 
Protein sequence
MNGKTSLSRK KIYKMKLKHK ALLPKFLRYD WDKYFRLERQ ERWRRTRGQD NKTRLRIKGF 
PKPVMVGFRS PKLIRYLHPT GLREVIVNNV YEVEELKESK DRVILRISGK VGLKKRLEII
SKAKELGFRV ANGE