Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0097 |
Symbol | rps3p |
ID | 5103905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 87072 |
End bp | 87794 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640505996 |
Product | 30S ribosomal protein S3P |
Protein accession | YP_001190198 |
Protein GI | 146302882 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0092] Ribosomal protein S3 |
TIGRFAM ID | [TIGR01008] ribosomal protein S3, eukaryotic/archaeal type |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000179661 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000500549 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | TTGGTTGATA TAAAGAAATA CTTCCTTCAA AAGTCCATGA CAAGAGTAAT GGTAGATGAG TTCTTAGCAA AGGAATATTA TAACGCTGAA TATGCTGGTT CTGAGATCAG CAAGACTCCC ATGGGTACTA GAGTTACAAT CTATGCGGGT AGACCAGCGA TCATTATAGG TAAAGATGGA AAGACAATAA AGAGGTTGGC CCAAATATTG GAGAAGTACT TTAACCTAGA GAATCCTCAG ATCACTGTAA CTCAGCCGGA GAAACCAGAG CTGAACGCTA GGGTAATGGC GTTCAGGCTA GCGGTGACCC TTGAGAAGGG ATATCACTTC CGAAGAGCTG CCTTCATGAC AATCAGGAGG ATAATGAACG CTGGAGCCCT TGGAGCAGAG GTGATAGTTA GCGGAAAGAT TACTTCAGAG AGAGCTAAGT TCGAGAAGCT TAAGGAGGGA ATAGTCTACA AGACCGGCAA TAACCTAGAT GTAATGGTGG ACAGGGCCAT AGCCATAGCC ACACTCAAGA TGGGAATATA TGGCGTTGAG GTGGTTATAA CGAAGCCCCT GAGGACCATA GATAAAATTT CGCTTAAACA AACTGCAGGC ACTAGTACTG GGGGCGAATC TGGAGAAGTT AGGGTAACAA ACGTGAGGAT AATTGATGAG ACCCAAAACG TTAAACTTGA GGAACAATTA GGAGGCGCAG AAAATGACCA AAAGAGTCAG TGA
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Protein sequence | MVDIKKYFLQ KSMTRVMVDE FLAKEYYNAE YAGSEISKTP MGTRVTIYAG RPAIIIGKDG KTIKRLAQIL EKYFNLENPQ ITVTQPEKPE LNARVMAFRL AVTLEKGYHF RRAAFMTIRR IMNAGALGAE VIVSGKITSE RAKFEKLKEG IVYKTGNNLD VMVDRAIAIA TLKMGIYGVE VVITKPLRTI DKISLKQTAG TSTGGESGEV RVTNVRIIDE TQNVKLEEQL GGAENDQKSQ
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