Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0095 |
Symbol | rps19p |
ID | 5103903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 86170 |
End bp | 86592 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640505994 |
Product | 30S ribosomal protein S19P |
Protein accession | YP_001190196 |
Protein GI | 146302880 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0185] Ribosomal protein S19 |
TIGRFAM ID | [TIGR01025] ribosomal protein S19(archaeal)/S15(eukaryotic) |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000607429 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000387819 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGTCAGTGG AGATTCCTGC CGAGTGGAAG AAGTTTAGGT ATAGGGGCAA ATCATTAGAA GAATTGTTGA ACATGCCAAT GGACGATTTT ATCAAGTTGT TACCCGCCAG ACAGAGAAGA TCTTTGAGGA AGGGTTTTAC TCCTTCAGAA AGGACTTTAA TTGAAAAGAT CAGGAAAATC AGAAGAGATT CAAAGGCAGA CAAGCCGATT AAGACCCATG TGAGAAGTCT GGTAATTTTA CCGGAGATGG TAGGTTTGAA ATTTGCAGTA TATAATGGCA AGCAATTCGT TGAGTTTCAA GTGGTGCCTG AGATGATAGG GCATTATCTA GGTGAGTTCT CTATACCGAT CCAGAAGGTA GAACATGGAG AACCTGGCCT TAAGGCTACA AGATCCAGCC TCTTCATGGC CATGAAAGGG TGA
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Protein sequence | MSVEIPAEWK KFRYRGKSLE ELLNMPMDDF IKLLPARQRR SLRKGFTPSE RTLIEKIRKI RRDSKADKPI KTHVRSLVIL PEMVGLKFAV YNGKQFVEFQ VVPEMIGHYL GEFSIPIQKV EHGEPGLKAT RSSLFMAMKG
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