| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0092 |
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| Symbol | rpl4lp |
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| ID | 5103900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 84378 |
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| End bp | 85169 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640505991 |
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| Product | 50S ribosomal protein L4P |
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| Protein accession | YP_001190193 |
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| Protein GI | 146302877 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | [TIGR03672] 50S ribosomal protein L4P |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000165336 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000383631 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | GTGTATACAA CTCTTTTAGA AAAAAGTACA AAAGTATTGG ATCTATCAGG AAACAAGGTA
AAGGACGTTC AGCTACCTTT AATCTTTAGT TATCCTGTAA GGAAGGACCT AATAAGGAGG
GCATTTCATT CGTCATTTAC GCAAGGTCTA CAGCCTAAAG GAAGGGATCC AATGGCTGGC
AAGAGAACCA CAGCTAAAAG TTTTGGTATA AACCTAGGTT TGGCGAGGGT TCCACGTATA
AGGGGAGCAG GTGAGGGTGC ACTAGCCCCT AATACAGCGG GAGGAAGATT GGCTTTTCCC
CCGTCTCCTA GGGAAAGAGT AAAGGAAGAC ATAAACGAGA AGGAAAAGAG GTTAGCCGTG
ATAAGCGCGT TGGCCTCTAC TACTATAAAG GAGATTGTAA CAAATAGAGG ACACAGGTTT
ACGGGTGATC TACCGCTAGT TGTGGTCGAT GATCTTGGAG GTATCAAGAA GACAGCAGAG
CTAGAGGAGA TCTTGATTAA GCTAGGACTG GAACAGGAAT TAAAAAGGGC CTCTTACAAG
AGAATAAGAG CAGGTAAGGG GAAGATGAGA GGGAGAAAGT ATAAGCGTAC GGTCGGACCA
TTGCTTGTTG TTCATGATCC CAAACTGCCT ATTGTGGAGG CAGCTCTAAA CTTGCCAGGC
GTAGATGTAG TATCAGCTAA AGATGTGAGT GTAATTCATC TGGCACCAGG AGGACATGCG
GGTAGATTAG TAATTTATAC CGAATCTGCC CTTAAGGTTC TCCAGGATAG ATTTAAGGGG
CTGATAAAAT GA
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| Protein sequence | MYTTLLEKST KVLDLSGNKV KDVQLPLIFS YPVRKDLIRR AFHSSFTQGL QPKGRDPMAG
KRTTAKSFGI NLGLARVPRI RGAGEGALAP NTAGGRLAFP PSPRERVKED INEKEKRLAV
ISALASTTIK EIVTNRGHRF TGDLPLVVVD DLGGIKKTAE LEEILIKLGL EQELKRASYK
RIRAGKGKMR GRKYKRTVGP LLVVHDPKLP IVEAALNLPG VDVVSAKDVS VIHLAPGGHA
GRLVIYTESA LKVLQDRFKG LIK
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