| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0089 |
|---|
| Symbol | ileS |
|---|
| ID | 5103897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 79263 |
|---|
| End bp | 82463 |
|---|
| Gene Length | 3201 bp |
|---|
| Protein Length | 1066 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640505988 |
|---|
| Product | isoleucyl-tRNA synthetase |
|---|
| Protein accession | YP_001190190 |
|---|
| Protein GI | 146302874 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0060] Isoleucyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00392] isoleucyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00020204 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.0000151931 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGTTTTTAA ATTCATACAA TGAAAACCCT TTCGTGTCAG ACTTATCTCC AGTGAGGCCC
CTTCAATCGA AATTTGAACC ATTGAAGATA GAAAAAGAGG TTTCAGATTT TTGGGTTGAG
AAAAAAGTTT ACAAGGCCTT AAAGGAATAC AACGGGAAAT TTACAAAGAA ATTCCTTTTC
ATAGATGGAC CACCTTATCC ATCCGCACCC ATACCCCATA TAGGCACCAT TTGGAATAAG
GTAATCAAGG ATTCCATCTT AAGATACAAG AGGCTTGAAG GTTATAGGGT CCACGACCAG
CCAGGTTATG ACACCCATGG ATTACCCATT GAGGTGGCCG TTGAGAGGAA GTTAAATATT
TCTCAAAAAA GGGATATATA TGATAAGATA GGTGTAGAGA AGTTTGTCCA GCTCTGTAGA
GATTTTGCAC TAACTAATCT GAATTCCATG TCCGAGAATT TCAAGAATGT CGGCGTATTC
ATGGATTGGG AGAATCCCTA TCTTACCTTG GATTCAACGT TTATCAGCAA CTCATGGGCT
GTAATAAAGA AGGCACATGA GAAGGGGTTA CTGGCAAGGG ATGTTCAAGT TTTGCACTGG
TGTCCAAGGT GCGAAACGAC GTTATCCGAT TACGAGGTGT CCGAGTACAA GGATATTGAG
GATCCTTCCA TATACGTCAA GTTTAAGGTA GTGGGATCCC AGAACAAGTT CCTGGTTATA
TGGACCACAA CCCCATGGAC CTTGCCCTCT AACGTCTTTG TGATGATAAA CAAGGACTAC
AAGTATGCTG AAGTTGAGGC TAATGGTGAG GTCTATATCA TTGCAGAGCA AAGAGTGGAG
GCGGTAATGA AGGAAGCTAA GATACAGAAG TTCAAGGTCC TTAGAACGTT CAAGGGAGAG
GAGATCCTTG GACTTCGCTA TGAACACCCA TTACGGGACA TAGTACCTGC ACAGCATAAC
ATTGACCAAT ATCACGTTGT GGTAGACGCG GGAGATAGGG TAACCCTGGA GGACGGTACT
GGTCTTGTGC ACTCTGCACC AGGGCACGGT GATGTGGATT TTGAGGTAGG CAAGTCCAAC
GGAATGCCTG TGGTGATGCT AGTAAATGAC AGAGGTCAGT TCACTGAAAT GGCAGGAAAG
TATGCTAACA TGAATGTCAG AGACTCGGCT AATGTGATAA TTCAGGACCT GAAAGAGAGA
GGCGCCCTTC TTCATGCTGG TAAGATAGTT CACCGTTATC CCATTTGCTG GAGATGTAAA
TCTCCACTAA TATTGAGGGC AATAGACCAG TGGTTTATTA GGGTCACCAA GTTAAAGAAT
AAACTACAAT CAGAGATAGA CAGAGTTAAC TGGATACCTT CTTGGGGGAG GACGAGAATA
GGGAATATGG TTGCCGAACT CAGGGACTGG GTGATAAGTA GGCAGAGGTT TTGGGGAAAT
CCGCTTCCCA TATGGGTATG TGAAAATGGG CATGTGAACG TAGTTGGGAG CGTGGAGGAA
CTAAAGAAGG TAGCCTTGAA TGAGGTTCCC GAAGATCTTC ATAAGCCTTG GATAGATAAC
GTTGTTATTC GATGTGAGAA ATGCGGGGCC AAAGCTAAGA GAGTTCCTGA TGTAGCGGAT
GTCTGGTTTG ACAGTGGCGT AGCCTTCTTT TCCAGCCTAG GAAAAGACTG GATGAGCAAG
TGGAAGGAGT TAGGCCCAGT GGACTTAGTT TTAGAAGGCC ATGATCAATT AAGGGGTTGG
TTCTTCAGCC TCCTTAGATC GGGAGTTATC TTAGATGATA GGGCTCCCTA TGAGGCAGTA
TTGGTTCATG GTTTCATGCT TGACGAGCAG GGAAGGGAGA TGCACAAGAG CCTAGGTAAT
TACGTTGAAC CTTCTGTTGT AATCGAGAAA TATGGAAGAG ATGTACTAAG GCTAATGCTA
TTGAGAAATA CCACATGGGA GGACGTCAAG TTTTCTGAGA AAAACCTCGA ACTATCACAA
AGAGACCTGC AAATTATATG GAACGTATTC CTCTTTACCT CAATGTACAT GAACCTAGAC
AACTTTAGTC CCACGAAGAT GAGCCTCGAG GAGGCGTTGA AATATGCTAG GGTGGAGGAT
AGATGGATAG TGTCGAGATT TTACAATATG CGGTCTAGGG TTAGCGAGGC GATGAGGGAT
TACAAGGTTC ATGAGTTAGC CAATGAATTG GTAAGATTCA TGATAGAGGA CATAAGCAGA
TTCTACTTGA GGCTTGTGAG GAAGAGGGCC TGGGAGGAAG GATTAAGCCA AGATAAGCTG
GTCCTCTACA CTATCTTGTA TTATATAATG CGTGAATGGT TGATAATGGC CTCAGCCGTC
GTTCCATATT TCGCCGAGAA AGTATATCAG ACCTTTGTGG TTAACGACAA GAAACTATCT
GTCTCCATGG AGATCTTAGG AAATGTAAGG AAAGACTTGA TTGACAATGA GCTCGAAGCC
ACGGTAGAAT TAATGAAAGC TATCTCTGAG GCTAGCTTGA ACGCTAGGGC AAAGGCCAAC
ATTAAACTTA GATGGCCAGT ATCAGTTGCC CACGTTTTCT TAAAGGACTC TGGCTTAATA
GCTAAGCTCG ATGAGAACAA GGAGCTATTA AAGACCCTCC TCAACTCCAA GGAAGTTAGA
TTCTACGATA TGGCGAAGTT TTACGAGTTC AGTCAGTTGA AGATAGAGCC AGATAAGGGA
GCCATAGGGA AGGAGTACAA AAGGTTGTCC CCTAGGATCG TACAATACGT GGAGAGCAAT
AAGGAGGTCA TAGCTAAGGA TATCCTTGAA AAGGGGTTCC ACACGGTGTT TATAGATGAC
ACGGAGGTAA AACTATCCAC AACACATCTA AGAATTACAG AGGAAGTGAA GCCAGAATAT
ACCAGCGGAT CCTTTGAGAG CGGGGTTGTA CTCATACCTA GGGAGATTAG CGGTAAGGAA
GAGGAGGAAG GAATAGTCAG AGATGTGATA AGGAGAATAC AATATATGAG AAAATTAATG
AACTTAAATG TAACCGATTA CATAATTGTC AGTATAGTCC CTCCACAGGA TAGAGCTGAG
GTTCTGGAAA AATTCAGGGA CTACATCTCT GCGGAGACCA GGTCTAAGGA AGTTATCATA
GGACAACAGG AGGGAGACCA GATTACCACC TGGGACATTG ATGGAGAAGA ATATACAATA
GGTATAAGAA AGGTTCAGTA G
|
|---|
| Protein sequence | MFLNSYNENP FVSDLSPVRP LQSKFEPLKI EKEVSDFWVE KKVYKALKEY NGKFTKKFLF
IDGPPYPSAP IPHIGTIWNK VIKDSILRYK RLEGYRVHDQ PGYDTHGLPI EVAVERKLNI
SQKRDIYDKI GVEKFVQLCR DFALTNLNSM SENFKNVGVF MDWENPYLTL DSTFISNSWA
VIKKAHEKGL LARDVQVLHW CPRCETTLSD YEVSEYKDIE DPSIYVKFKV VGSQNKFLVI
WTTTPWTLPS NVFVMINKDY KYAEVEANGE VYIIAEQRVE AVMKEAKIQK FKVLRTFKGE
EILGLRYEHP LRDIVPAQHN IDQYHVVVDA GDRVTLEDGT GLVHSAPGHG DVDFEVGKSN
GMPVVMLVND RGQFTEMAGK YANMNVRDSA NVIIQDLKER GALLHAGKIV HRYPICWRCK
SPLILRAIDQ WFIRVTKLKN KLQSEIDRVN WIPSWGRTRI GNMVAELRDW VISRQRFWGN
PLPIWVCENG HVNVVGSVEE LKKVALNEVP EDLHKPWIDN VVIRCEKCGA KAKRVPDVAD
VWFDSGVAFF SSLGKDWMSK WKELGPVDLV LEGHDQLRGW FFSLLRSGVI LDDRAPYEAV
LVHGFMLDEQ GREMHKSLGN YVEPSVVIEK YGRDVLRLML LRNTTWEDVK FSEKNLELSQ
RDLQIIWNVF LFTSMYMNLD NFSPTKMSLE EALKYARVED RWIVSRFYNM RSRVSEAMRD
YKVHELANEL VRFMIEDISR FYLRLVRKRA WEEGLSQDKL VLYTILYYIM REWLIMASAV
VPYFAEKVYQ TFVVNDKKLS VSMEILGNVR KDLIDNELEA TVELMKAISE ASLNARAKAN
IKLRWPVSVA HVFLKDSGLI AKLDENKELL KTLLNSKEVR FYDMAKFYEF SQLKIEPDKG
AIGKEYKRLS PRIVQYVESN KEVIAKDILE KGFHTVFIDD TEVKLSTTHL RITEEVKPEY
TSGSFESGVV LIPREISGKE EEEGIVRDVI RRIQYMRKLM NLNVTDYIIV SIVPPQDRAE
VLEKFRDYIS AETRSKEVII GQQEGDQITT WDIDGEEYTI GIRKVQ
|
|---|
| |