| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0082 |
|---|
| Symbol | |
|---|
| ID | 5104660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 72127 |
|---|
| End bp | 72513 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640505981 |
|---|
| Product | prefoldin subunit beta |
|---|
| Protein accession | YP_001190183 |
|---|
| Protein GI | 146302867 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1382] Prefoldin, chaperonin cofactor |
|---|
| TIGRFAM ID | [TIGR02338] prefoldin, beta subunit, archaeal |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0164656 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.000222575 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAAA GAATTCCTCC TGAACTCCAA ACCCAGCTTC TAAAATTACA ACAATTACAA
AGCCAGTTAG AGAGGCTGAC CTATGAGAAG AGTGTTATTG AGGGCGAGTT AAGAGAGGTC
AATGAGGTTT TGAAGGAACT AGCTAATATA CCGCAGGACT CGCCTGTCTA CAAGATTGTG
GGCAACCTCC TAATTAAACA GGACAGAAAT AACGTTCAAA ACGAGCTTAA CGAAAGGAAA
GAATTACTTG AACTTAAGAG CAGGACATAT CAAAAACAAG AAGGACTTCT CAGGAAACAG
TTTGAGGATC TACAGAAAAA GGTCAATGAG TTAATTCAGA AGTACTATCC GCAGGGCGCA
CCAGGAGCTT CTCCTCCAAA GGCTTAA
|
|---|
| Protein sequence | MAERIPPELQ TQLLKLQQLQ SQLERLTYEK SVIEGELREV NEVLKELANI PQDSPVYKIV
GNLLIKQDRN NVQNELNERK ELLELKSRTY QKQEGLLRKQ FEDLQKKVNE LIQKYYPQGA
PGASPPKA
|
|---|
| |