Gene Msed_0055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0055 
Symbol 
ID5104633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp51572 
End bp51862 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content44% 
IMG OID640505950 
Product50S ribosomal protein L14e 
Protein accessionYP_001190156 
Protein GI146302840 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2163] Ribosomal protein L14E/L6E/L27E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.464279 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCATAA TTGAAGTGGG TAGGATTTGC GTTAAACTAT CTGGACGCGA AGCCGGGAGT 
AAATGTGTCA TAGTTGATAT AATAGACAAT AATTTCGTCC TTGTAACAGG TCCAAAGAGC
ATCAGCGGGG TTAAGAGAAG GAGGGTAAAC ATATCCCATC TGGAGCCCAC CGATAAGACA
GTGGAGATAG GGAAGGGAGC CTCGGACCAA GAAGTAGAGG CCAAGCTGAA GGAGCAAGGA
CTAGTAGATT TTATGAAGGA AAAGGTGAAG GTAAAAATTC CAGTGATTTG A
 
Protein sequence
MAIIEVGRIC VKLSGREAGS KCVIVDIIDN NFVLVTGPKS ISGVKRRRVN ISHLEPTDKT 
VEIGKGASDQ EVEAKLKEQG LVDFMKEKVK VKIPVI