| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0048 |
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| Symbol | ribH |
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| ID | 5105187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 43878 |
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| End bp | 44333 |
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| Gene Length | 456 bp |
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| Protein Length | 151 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640505943 |
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| Product | 6,7-dimethyl-8-ribityllumazine synthase |
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| Protein accession | YP_001190149 |
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| Protein GI | 146302833 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0054] Riboflavin synthase beta-chain |
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| TIGRFAM ID | [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.019705 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.470789 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGGACA GCTCGATTAA GCTAGGGATA GTGGTTGCGG AGTTTAACTA CGACATCACC
CACTTGATGC TAGACAGGGC GATTTCTCAC GCTAAGTTCC TCAATGCGGA AGTCAGGGCA
GTATTCAAGG TCCCTGGAAC CTTCGAGATC CCTCTCGCCG TGAAGCAGTT GCTGTCCAGG
GATGATATAG ACTGTGTTGT TACCCTGGGG GCAGTAATTA AGGGAGAAAC TAAACATGAC
GAGGTAATTG CCAATCAGGT AGCCAGGTTG GTATCGGACC TATCCCTTGA GTTCAACAAG
CCTGTTTCCC TGGGGATTAT AGGACCCGGA GCCACGCATG AGCAGGCCAT GGAAAGAATT
GAGGAGTATT CCACTAGGGC AGTCGAATCA GCCGTGAAGA TGGCAAGGAG AATGAGATCC
ATGATGGAGG GTAGTTCCTC GGTGAACATA GAGTGA
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| Protein sequence | MQDSSIKLGI VVAEFNYDIT HLMLDRAISH AKFLNAEVRA VFKVPGTFEI PLAVKQLLSR
DDIDCVVTLG AVIKGETKHD EVIANQVARL VSDLSLEFNK PVSLGIIGPG ATHEQAMERI
EEYSTRAVES AVKMARRMRS MMEGSSSVNI E
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