| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0044 |
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| Symbol | |
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| ID | 5105183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 41464 |
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| End bp | 42219 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640505939 |
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| Product | hypothetical protein |
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| Protein accession | YP_001190145 |
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| Protein GI | 146302829 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4920] Predicted membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.013501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.305707 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTTCAG CGACACCCAA TCCTTATAAT TGGAAATTTG CGCTTATTAG CCAGACATAT
CTCGTTGTAA TATCTATAGT ATTAGGATTT TATCCAAAAT ATTTCCTTGA GGCGTTTATC
TCTTATTTCA TTATAATAAT GGCAATCACT TTTTCCATGA CTTACAAGTC TAATCCAATG
CTTAGGGATA GGAAATTAAT GATGGAAGTG GCAAATTCTG GAACGTTATA TGAGGAGAAG
AACGCTAATG ATCTTGTCAT GAAGGACGAG GAATATCAAA GGGAGTACAT GCAGTTCGCC
AAGAAGAATA TGACCATGTT GTTCTCGTAC CTTATCTATA TTGTTGTATT ATTCTTCGTG
TATAGTTACG TTTCTAAAAT TGCTACCTCT CAGACGGACC CATATTATAG GCTTGCAGTT
TATCTAGTTT ATTTTGAAAT AATATATCTG TTTGGATTCT TTGTATACAG GAGGCTGTTT
AAGCCTAGCA TGATGTCAAC AATGGCTCCA TTAAGTTATA AGGTAACGGA GAAGGGAGTA
ATTGGATCGG GAGGTATGTC TGTCTTTCTT CACGCCAAGC ATTTACTTAA CTCCAATTTT
GTGGTTAATA GGGAAAAGAA ATATGTTGAG ATAGACTCGA CTGAGGCAAA ATATCCATAC
AAGATTAGAC TTTATGCTAA GGATATTGAC AAACTATTGG ACATGCTGGA GAGAGTAAAG
AGACTAGAAT TAAAGAGACA GTCTCAAACT GGCTAA
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| Protein sequence | MSSATPNPYN WKFALISQTY LVVISIVLGF YPKYFLEAFI SYFIIIMAIT FSMTYKSNPM
LRDRKLMMEV ANSGTLYEEK NANDLVMKDE EYQREYMQFA KKNMTMLFSY LIYIVVLFFV
YSYVSKIATS QTDPYYRLAV YLVYFEIIYL FGFFVYRRLF KPSMMSTMAP LSYKVTEKGV
IGSGGMSVFL HAKHLLNSNF VVNREKKYVE IDSTEAKYPY KIRLYAKDID KLLDMLERVK
RLELKRQSQT G
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