| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0042 |
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| Symbol | rps10p |
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| ID | 5105181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 39760 |
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| End bp | 40068 |
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| Gene Length | 309 bp |
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| Protein Length | 102 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640505936 |
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| Product | 30S ribosomal protein S10P |
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| Protein accession | YP_001190143 |
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| Protein GI | 146302827 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01046] ribosomal protein S10(archaeal)/S20(eukaryotic) |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00000120116 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.273764 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAAATA AAGCTAGAAT ACGACTGTGG AGCACCAACG TTAACAACCT TAATTATGTT
GTAAATCAGA TAAAGGGTAT AGTGGATAAG ACAGGCGTCA GTATGAGAGG GCCTATACCA
CTTCCCACGA GGAGAATGGA AGTACCTGTG ATGAGGTTGC CGCATGGCGA GGGAAGGAAG
AAGTGGGAGA AGTGGGAAAT GTCCCTCCAC AAGAGGATAA TTGATATTTC TGCTGATGAA
AGGGTAATGC GCCAGCTAAT GAGAGTAAAG GTTCCAGAGG ACGTGTATAT AGAGATTCAA
CTTATTTAG
|
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| Protein sequence | MPNKARIRLW STNVNNLNYV VNQIKGIVDK TGVSMRGPIP LPTRRMEVPV MRLPHGEGRK
KWEKWEMSLH KRIIDISADE RVMRQLMRVK VPEDVYIEIQ LI
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