Gene Msed_0037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_0037 
Symbol 
ID5105176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp36339 
End bp36770 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content38% 
IMG OID640505931 
Producttranscription elongation factor NusA-like protein 
Protein accessionYP_001190138 
Protein GI146302822 
COG category[K] Transcription 
COG ID[COG0195] Transcription elongation factor 
TIGRFAM ID[TIGR01952] NusA family KH domain protein, archaeal 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000224532 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.180707 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTGATA TAAAGTTAAC CCCTGAAGAA ATGCGATACA TGTCCCTTTT CCAAGACGTT 
ACAAAGGTCA CTGTTAGGGA CTGTGTAATA GATGAGGAAG GCAATAGAAT AATTTTCCTA
GTAGATCCAG AAAATATGGG AATGGCTATT GGAAAAGGAG GAATGAACAT CAAAAAACTA
AAGAAGATTA TCGGTAAGGA CATCGAGGTA GTAGCATATA GCGAAAACTT GGAAGATCTT
ATAAAGAACC TTATGTCTCC CGCTAGGGTT AAGAGCGTCA AAACTATAGA TAGTAATTCA
AGGAAGACGG TACACGTAAC AGTAGATCCT CAAGACAAGG CTATAGCAAT CGGTAAAGCA
GGCAGAAACG TTTCTCGGGC CAAAATAATT TTAAAAAGAT ACATGGACAT AGACTCCGTG
ATAATTAATT AA
 
Protein sequence
MPDIKLTPEE MRYMSLFQDV TKVTVRDCVI DEEGNRIIFL VDPENMGMAI GKGGMNIKKL 
KKIIGKDIEV VAYSENLEDL IKNLMSPARV KSVKTIDSNS RKTVHVTVDP QDKAIAIGKA
GRNVSRAKII LKRYMDIDSV IIN