Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_0037 |
Symbol | |
ID | 5105176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 36339 |
End bp | 36770 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640505931 |
Product | transcription elongation factor NusA-like protein |
Protein accession | YP_001190138 |
Protein GI | 146302822 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01952] NusA family KH domain protein, archaeal |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000224532 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.180707 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCTGATA TAAAGTTAAC CCCTGAAGAA ATGCGATACA TGTCCCTTTT CCAAGACGTT ACAAAGGTCA CTGTTAGGGA CTGTGTAATA GATGAGGAAG GCAATAGAAT AATTTTCCTA GTAGATCCAG AAAATATGGG AATGGCTATT GGAAAAGGAG GAATGAACAT CAAAAAACTA AAGAAGATTA TCGGTAAGGA CATCGAGGTA GTAGCATATA GCGAAAACTT GGAAGATCTT ATAAAGAACC TTATGTCTCC CGCTAGGGTT AAGAGCGTCA AAACTATAGA TAGTAATTCA AGGAAGACGG TACACGTAAC AGTAGATCCT CAAGACAAGG CTATAGCAAT CGGTAAAGCA GGCAGAAACG TTTCTCGGGC CAAAATAATT TTAAAAAGAT ACATGGACAT AGACTCCGTG ATAATTAATT AA
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Protein sequence | MPDIKLTPEE MRYMSLFQDV TKVTVRDCVI DEEGNRIIFL VDPENMGMAI GKGGMNIKKL KKIIGKDIEV VAYSENLEDL IKNLMSPARV KSVKTIDSNS RKTVHVTVDP QDKAIAIGKA GRNVSRAKII LKRYMDIDSV IIN
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