| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0027 |
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| Symbol | rps28e |
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| ID | 5105166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 24408 |
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| End bp | 24650 |
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| Gene Length | 243 bp |
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| Protein Length | 80 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640505921 |
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| Product | 30S ribosomal protein S28e |
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| Protein accession | YP_001190128 |
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| Protein GI | 146302812 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2053] Ribosomal protein S28E/S33 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00920354 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAGCGAAA AACAACAGTC CTCTTCAATC ATTGAGGAAT TCGGCTTTCC AGCTGAGGTC
ATTCAATTAT TAGACAGAAC TGGAGTAACT GGGGAGGTTA CACAGGTAAG GGTAAGGGTT
CTTGAAGGAA GAGACAAGGG TAGGATACTA ACCAGAAATA TTAAGGGTCC AGTGAGACTG
GGTGACATTG TAATTCTTAG GGAGACAGAA AGGGAGGCAA GAAAGCTAAC AACCAAGAGG
TAA
|
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| Protein sequence | MSEKQQSSSI IEEFGFPAEV IQLLDRTGVT GEVTQVRVRV LEGRDKGRIL TRNIKGPVRL
GDIVILRETE REARKLTTKR
|
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| |