| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0024 |
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| Symbol | gatB |
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| ID | 5105163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 21947 |
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| End bp | 23374 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640505918 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_001190125 |
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| Protein GI | 146302809 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00417357 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGAAC CTAAGGCTAG AATAGGTCTG GAAGTTCACG TCCACTTGAC TTCCCTGAAA
ACGAAACTTT TCTGCCCTTG CCCCGCGGAT TACGTGAATC TGGATCCCAA CACGGATTTG
TGCCCAGTTT GCCTAGGTCT TCCCGGTGCC ATACCAGTAC TAAATGAAGA GGCCCTAAAC
AAGGCCTTGA TGGTCGCTAT AGCCTTGGAA TGCGAGTATC CCAAGTATCT GACTTTTACT
AGGAAGCATT ATTTCTATCC TGATATGGCA AAAAATTATC AAATTTCTCA GTATGATGGG
CCAGGAAGTA TGGCTATTGC GAGAAATGGT AAGATCGCTC TTGGTGAAAA AATTATTAGA
ATTAGAAGGA TAAATATAGA AGAAGATCCA GCTAAGACTA TCTATCCCAC AGGATCCATG
TTAACCAGTA CATATACTCT CCTGGACTAC AACAGGTCTG GAATGGGAAT GCTAGAAATA
GTTACGGAGC CTGACCTAGA AAACTCTAAG GAAGCCAAAT TATTCTTGGA CAAGCTAAAG
TCTATATTGG AACACTTAGG AGTGTGCGAT TGTGAGATTG AAGGTTCCAT GAGAGCTGAC
GTAAACATCT CTGTGGAGGG GGGAGAGAGA GTTGAAGTCA AGAACGTTGG ATCCCCCAAG
GACGTTAAGG AAGCAATAGA GTATGAGGTA GCCAGACAGA GGGCAGCTAT ATTACAGGGG
CAAAAGGTGC CGAGAGAAAC TAGGCACTGG GATTCTGCCA GGAAGGTTAC AGTCTCGTCT
AGGGCAAAGG AGACCGATGA AGATTATAGG TATTTTCCAG ACCCAGACCT TCCTCCTTAT
GAGATCTCCT CCGATCTTAT CAGGAAGATT AGGGAAAACC TACCAGAGCT TCCGGATGCT
AGGATAGAGA GAATGATAAA ACAATATGGA ATAAGTAGGT ATAATGCTAC AGTTCTAGTG
ATGGACAAGG CCCTGGCTGA CCTATTTGAG GCGACTGCCA AGAATTACAA TAACTACGAG
AAATTATCCA ACTTAATAAT CAACGATTAC CTCAGATGGA TAAACGACAA AAACATGAAG
ATAACAGATT CTAAGGCCAC ACCACAACAC CTGAGCCAGT TGCTAGAGTT AATGGATAAG
GGTACCATAA CGATAAAGAT CGTTAAGGAG ATATTGCCCA TTATAATCAC CGAGGGTAAG
ATGCCCAGCG ATATAGTAAC GGCGATGGGT CTGACTACAG TGTCAGATGA AAAATTAATA
GAGGGGATAG TCGACGAAGC ACTGAGGAAT GAGCCCGAGC TACTTCAGAA GGTTAAGAAG
GATCCTAAGG TCGCCAATTA CCTCGTAGGA ATAGTAATGA AGAAAACAGG AAAGAGAGCA
GACCCTAAGC TAGTCAATGA CATCATCAAA AGAAAGCTAG GCATTTAA
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| Protein sequence | MSEPKARIGL EVHVHLTSLK TKLFCPCPAD YVNLDPNTDL CPVCLGLPGA IPVLNEEALN
KALMVAIALE CEYPKYLTFT RKHYFYPDMA KNYQISQYDG PGSMAIARNG KIALGEKIIR
IRRINIEEDP AKTIYPTGSM LTSTYTLLDY NRSGMGMLEI VTEPDLENSK EAKLFLDKLK
SILEHLGVCD CEIEGSMRAD VNISVEGGER VEVKNVGSPK DVKEAIEYEV ARQRAAILQG
QKVPRETRHW DSARKVTVSS RAKETDEDYR YFPDPDLPPY EISSDLIRKI RENLPELPDA
RIERMIKQYG ISRYNATVLV MDKALADLFE ATAKNYNNYE KLSNLIINDY LRWINDKNMK
ITDSKATPQH LSQLLELMDK GTITIKIVKE ILPIIITEGK MPSDIVTAMG LTTVSDEKLI
EGIVDEALRN EPELLQKVKK DPKVANYLVG IVMKKTGKRA DPKLVNDIIK RKLGI
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