| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0019 |
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| Symbol | |
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| ID | 5104248 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 17075 |
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| End bp | 18016 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640505913 |
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| Product | AIR synthase-like protein |
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| Protein accession | YP_001190120 |
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| Protein GI | 146302804 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0611] Thiamine monophosphate kinase |
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| TIGRFAM ID | [TIGR01379] thiamine-monophosphate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.213041 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00139533 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGAAGCTAA AGGAGTTAGG AGAGCACAGT TTCATTGAAA CAGTCATTTC CAAGTACGTA
AATTCGGATG TGAACCTGGA CGTCTACAGG CAAGGAAATG TTGTTCTGAA AATAGACGGA
TTTCCTATTA AATATACAAT GCCCTTTATG GACTTTTATG ATCTAGGATG GAAGGCAGTA
GTTGCCGCTA TGAGTGATCT AGTCTCCTAT GGCGCTACAC CTCTAGTTGT TCTATCGTCT
TTCGGGCTTA GTCCTGAAAT AGAGTCTAAG AACGCCGAGA TGATGATAAT GGGAATAAGT
GACGCCTCAA AATATTACGG AGCTACCTAT GGCGGAGGGG ATACAAATTC TTCAGAAGAC
TCTGGCTGGA TCGATATAGC GATATTTGGT AATCCTGTTT GTAACACAAG ACCCAAGGCA
GAACCCGGAG ACTTAGTTTA TGTTACAGGA GAGTTAGGAA GAACTACAGG CGCCTTTCTC
TGGTATAGTT CGGGTGGGAA GTTTCCCCTA CCCTTAGACT CAGTGATCAA GCTTAGACAT
CCTGTAATCA ACAGGGCCAT TTTGCGTGCT CATAGGGAGC TCTGTAGCGT TGTGGCACTT
GGAACTGATG TGAGTGATGG GATTCTAGTT AGTCTTAACA AAATAGCCCA CTATATTGGA
CACGGAATTG ACATTGCTAA TATTCCATTA GTGGAATATA TACAGGAGTT AGTTGATAAG
AACATAGTTA GTCTAAATGA AATATTAAAA TCTGGAGGAG AAGAATATGA GACGATCTTC
GTAGTGAAGA AGGAGACATC ATCCATTTTT CTGGACGCAA TGAAAAGGTA TGGCGTGATC
GTTAAAGAAA TTGGAAGAGT AATTGATAGT GAACCAGAAA TTAGATTGAA TTCAAAGAAA
TACGAGGTTC ACGGTTGGGA TAACTTCAAG GGTTGGTTTT AG
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| Protein sequence | MKLKELGEHS FIETVISKYV NSDVNLDVYR QGNVVLKIDG FPIKYTMPFM DFYDLGWKAV
VAAMSDLVSY GATPLVVLSS FGLSPEIESK NAEMMIMGIS DASKYYGATY GGGDTNSSED
SGWIDIAIFG NPVCNTRPKA EPGDLVYVTG ELGRTTGAFL WYSSGGKFPL PLDSVIKLRH
PVINRAILRA HRELCSVVAL GTDVSDGILV SLNKIAHYIG HGIDIANIPL VEYIQELVDK
NIVSLNEILK SGGEEYETIF VVKKETSSIF LDAMKRYGVI VKEIGRVIDS EPEIRLNSKK
YEVHGWDNFK GWF
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