| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_0003 |
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| Symbol | |
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| ID | 5105019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 2038 |
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| End bp | 2973 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640505896 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001190104 |
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| Protein GI | 146302788 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1607] Acyl-CoA hydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0806344 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGTACA CGTATAGAAC AGAAACTTAC TATAACGTAT TCCCATGGCA CACTAACCAC
TTCGGATCGC TTCACGGCGG AATCTACATG AGCTGGCTCA TAGATACTGC AGGCATTCTC
ATGTCATCGG TGAGCCAAGG AAACTATCTC CTGGCTTCTG TGGATTACCT CTACCTCTTC
AAGCCAGCTA GATTGGGAGA CATTCTGAGA GTTACTGCTG AGGCCAAGGC CTCGTGGAAA
AGTTCGGTGG AAATTGAGGT AACTGGTTGT ATCAAGAGGG GGAATACAGA GGAGTTGGGT
GCCATAGGGT TAATGAGTTA CGTCGCCGTG GATGAAAACG GGAGACCCAG ACCCCTCACC
GTTAAGATAG AGGGCGATGA AGGAGCCGAG AAGAGAAGAG TGAAAAGACT GGAAAGGAAG
AAAATGGTCT CTGAGGACAC GTCTGAACTC CTGCCTGGAA TGACCTTCGG AAGAAGTTAC
ATAAGGACCA TATATCCAGA ACACGGTTTC GGAAACGGTA TACTTTACGC AGGGAAAATG
TACATGATGC TAGATGAGGC GTTGGCCATA GTCGCGAAGA TGTATTCTAA GGGTAACACT
TTCACGGCGA GTGCAGGTTC GGCCGACTTC CTTGTTCCAG TGAAGATAGG TGATATACTT
GAAATTCAGG GAGCAGTGGA ATATACGGGG AATACTTCCC TGGATGTGGG AGCCAAGATA
TTTGCCATAA ATCACTTCAC CGGTAGCAGG AGGCTAGTAT CTAGGACAGT GTTCTCCTTC
GTCTCCATCG ACGAGAATGG GAAACCTAGG CCCATACAGA AACTGGAACC CTCCTCAGAA
TACGAGAGAA GGATCATGGA GGAGAGGCTT AAGGAAAGGG AGGAAAGGAT AAGCATGGGT
AAGTCTCTTC AGAAGAGGAC TTGCTACGAT TCGTGA
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| Protein sequence | MTYTYRTETY YNVFPWHTNH FGSLHGGIYM SWLIDTAGIL MSSVSQGNYL LASVDYLYLF
KPARLGDILR VTAEAKASWK SSVEIEVTGC IKRGNTEELG AIGLMSYVAV DENGRPRPLT
VKIEGDEGAE KRRVKRLERK KMVSEDTSEL LPGMTFGRSY IRTIYPEHGF GNGILYAGKM
YMMLDEALAI VAKMYSKGNT FTASAGSADF LVPVKIGDIL EIQGAVEYTG NTSLDVGAKI
FAINHFTGSR RLVSRTVFSF VSIDENGKPR PIQKLEPSSE YERRIMEERL KEREERISMG
KSLQKRTCYD S
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