| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4617 |
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| Symbol | gidB |
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| ID | 5106927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 5065158 |
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| End bp | 5065802 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640505887 |
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| Product | 16S rRNA methyltransferase GidB |
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| Protein accession | YP_001190095 |
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| Protein GI | 146309630 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
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| TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGGTCA CTCAGCGTCA CGCCGAAGAA CTGCTGCAGG GCGCTCGCGA GCTGGGCATC
GAGCTCAGCG AGCGGCAGCA GGAACAACTG CTCGCCTACC TGGGCCTGCT GATCAAGTGG
AACAAGGCCT ACAACCTCAC CGCGGTGCGC GACCCGGACG AAATGGTGTC GCGCCATCTG
CTCGACAGCC TGTCGGTGGT GCCGTTCGTG GCCGAGCGAG GGGATAACTG GCTGGATGTC
GGCAGTGGCG GCGGCATGCC CGGTATTCCC CTGGCGATCA TGTTTCCCGA GCGGCGTTTC
ACCCTGCTCG ACTCCAACGG CAAGAAGACC CGTTTTCTGG TCCAGGTGAA GCTGGAGCTG
AAACTCGCCA ACCTAGAGGT GGTCCACAGC CGGGTCGAAA CCTATCGCCC CGAGCAGCCG
TTCGACGGCA TCAGCTCGCG GGCCTTCAGC AGCCTGCAGG ACTTCAGCGA CTGGACCCGC
CACCTGGGCA GTGCCGATAC CCACTGGCTG GCCATGAAGG GCTTGCACCC GGGCGACGAG
CTGCAGGCCC TGCCGGCGGA CTTCCGTCTC GATGCCACCC ATGTGCTGCG GGTTCCCGGT
TGCCAAGGCC AGCGCCATCT GTTGATACTG CGTCGCTCGG TCTAA
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| Protein sequence | MSVTQRHAEE LLQGARELGI ELSERQQEQL LAYLGLLIKW NKAYNLTAVR DPDEMVSRHL
LDSLSVVPFV AERGDNWLDV GSGGGMPGIP LAIMFPERRF TLLDSNGKKT RFLVQVKLEL
KLANLEVVHS RVETYRPEQP FDGISSRAFS SLQDFSDWTR HLGSADTHWL AMKGLHPGDE
LQALPADFRL DATHVLRVPG CQGQRHLLIL RRSV
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