Gene Pmen_4608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4608 
Symbol 
ID5106918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp5058243 
End bp5059106 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content59% 
IMG OID640505878 
ProductF0F1 ATP synthase subunit gamma 
Protein accessionYP_001190086 
Protein GI146309621 
COG category[C] Energy production and conversion 
COG ID[COG0224] F0F1-type ATP synthase, gamma subunit 
TIGRFAM ID[TIGR01146] ATP synthase, F1 gamma subunit 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGCG CAAAAGAGAT TCGCAGCAAG ATTGCGAGCA TCAAAAGCAC GCAAAAGATC 
ACCAGCGCCA TGGAAAAAGT GGCGGTCAGC AAAATGCGCA AGGCTCAACA GCGCATGGCT
GCCGGTCGCC CCTACGCCGA GCGTATTCGT CAGGTGATCG GTCACCTGGC CAAGGCGAAC
CCGGAATACC GCCACTCGTT CATGGTGGAG CGTGATGTAA AGCGCGTCGG TTATATCGTG
GTGACCTCGG ATCGTGGTCT GTGCGGTGGC TTGAACATCA ACCTGTTCAA GGCGTTGTTG
AAAAGCCTGA AGGAATGGCG CGACCAGAAG GTCGAGGCCG ATTTCTGCGT GGTGGGCACC
AAGGGCGCGA GCTTCTTCCG CAGCAACGGG GGCAACGTGG TTGCCGCCAT CAGCAAGCTG
GGTGAAGAGC CGTCCATCAA CGACCTGATC GGTAGCGTCA AGGTCGTGCT GGATGCCTAC
GCCGAGGGCC GTATCGACCG CCTGTATCTG GTGTCGAACA AGTTCGTCAA CACCATGACG
CAGAAGCCGG AAGTGCAGCA GTTGCTGCCG CTGGCCGCCA GCGATGCGCA GGGTGTACAG
AAAGGTCTGT GGGACTACGT GTACGAGCCG GACGCCCAGC AACTGCTGGA TGCCCTGTTG
GTACGCTACA TCGAGTCGCA GGTCTATCAG TCCGTGGTCG AGAACAGCGC GTGCGAACAG
GCTGCGCGGA TGATCGCGAT GAAGAACGCA ACCGACAACG CCGGTGATCT CATCAAAGAC
CTGCAGCTGG TTTACAACAA GGCGCGTCAG GCAGCGATCA CCCAGGAAAT TTCGGAAATC
GTCGGCGGCG CTGCCGCGGT TTAA
 
Protein sequence
MAGAKEIRSK IASIKSTQKI TSAMEKVAVS KMRKAQQRMA AGRPYAERIR QVIGHLAKAN 
PEYRHSFMVE RDVKRVGYIV VTSDRGLCGG LNINLFKALL KSLKEWRDQK VEADFCVVGT
KGASFFRSNG GNVVAAISKL GEEPSINDLI GSVKVVLDAY AEGRIDRLYL VSNKFVNTMT
QKPEVQQLLP LAASDAQGVQ KGLWDYVYEP DAQQLLDALL VRYIESQVYQ SVVENSACEQ
AARMIAMKNA TDNAGDLIKD LQLVYNKARQ AAITQEISEI VGGAAAV