Gene Pmen_4605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4605 
Symbol 
ID5106915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp5054824 
End bp5056182 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content65% 
IMG OID640505875 
Productglucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase 
Protein accessionYP_001190083 
Protein GI146309618 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 
TIGRFAM ID[TIGR01173] UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTGG ATATCGTCAT TCTGGCCGCC GGCCAGGGTA CGCGGATGCG TTCAGCGTTG 
CCCAAGGTGC TGCACCCGGT CGCCAACAAG CCCATGCTCG GGCATGTGAT CGACACTGCG
CGCAGCCTGC AGCCGCAGAG CATCCAGGTG GTGATCGGCC ATGGCGCCGA CACCGTGCGC
GAACGCCTGG CCGCCGATGA CCTGAATTTC GTCATCCAGG CCGAGCAGCT GGGTACCGGT
CATGCCGTGG CTCAGGCGCT GCCGCAACTC AGCGCCGAGC GCGTGCTGAT TCTCTATGGC
GATGTGCCGC TGATCGAAAC GGCTACCTTG CAGCGTCTGC TGGCGTTGGT CAGTGACGAT
CAGCTGGGCC TGCTTACCGT CGAACTGGCC GATCCGACCG GCTATGGCCG TATCGTGCGC
GATGACAGCG GTGTGGTGCA GGCCATCGTC GAACACAAGG ACGCCAGCGA CGCGCAGCGG
CAGATCCGCG AAGGCAACAC CGGCATCCTC GCCGTTCCCG GCAAGCGCCT GGCCGACTGG
TTGGGCCGTC TGTCCAACAG CAACGCTCAG GGCGAGTACT ACCTGACCGA CGTGATCGCC
ATGGCCGTGG CCGATGGCCT GACCGTGGCC ACCGAGCGTG CCGCCGACGA GATGGAAGTG
CTGGGTGCCA ACGACCGCAT CCAGCTCGCG CAGCTCGAAT GCCACTACCA GCAGCGCATG
GCCCGTCGCC TGATGGCCCA AGGCGTGACC CTGCGTGATC CGCATCGCTT CGATGTGCGC
GGGCAGGTGA GCGTTGGCCG CGACGTGACC ATCGATATCA ACGTCATCCT CGAAGGCAAG
GTGGTCATCG AGGACGATGT GCAGATCGGC CCGAACTGCG TGATCAAGGA CTCGGTGCTG
CGCAAGGGCG CTATCGTCAA GGCCAACAGC CACCTGGACG GCGCCGAGAT GGGCGAGGGC
GCCGATTGCG GCCCGTTTGC CCGCCTGCGT CCTGGCAGCA AGCTGGGCGC CAAGGCCCAT
GTGGGTAACT TCGTCGAGCT GAAGAACGCG GTAATGGGCG AAGGCGCCAA GGCCGGCCAC
CTGAGCTACC TGGGCGATGC CGAAATCGGC GCGCGCAGCA ATATCGGCGC CGGCACCATC
ACCTGCAATT ACGACGGTGC CAACAAATTC CGCACGGTCA TGGGTGAGGA TGTGTTCATC
GGCTCCAACA GTGCGCTGGT GGCACCGGTC ATGCTGGGCG ACCGTGCGAC CACGGGCGCC
GGTTCGGTAG TGACCAGCGA CGTGCCGGCC GATACGCTGG CAGTGGGTCG GGCCAAGCAG
CGCAATATCG AAGGCTGGAA GCGCCCCACC AAGAAGTGA
 
Protein sequence
MSLDIVILAA GQGTRMRSAL PKVLHPVANK PMLGHVIDTA RSLQPQSIQV VIGHGADTVR 
ERLAADDLNF VIQAEQLGTG HAVAQALPQL SAERVLILYG DVPLIETATL QRLLALVSDD
QLGLLTVELA DPTGYGRIVR DDSGVVQAIV EHKDASDAQR QIREGNTGIL AVPGKRLADW
LGRLSNSNAQ GEYYLTDVIA MAVADGLTVA TERAADEMEV LGANDRIQLA QLECHYQQRM
ARRLMAQGVT LRDPHRFDVR GQVSVGRDVT IDINVILEGK VVIEDDVQIG PNCVIKDSVL
RKGAIVKANS HLDGAEMGEG ADCGPFARLR PGSKLGAKAH VGNFVELKNA VMGEGAKAGH
LSYLGDAEIG ARSNIGAGTI TCNYDGANKF RTVMGEDVFI GSNSALVAPV MLGDRATTGA
GSVVTSDVPA DTLAVGRAKQ RNIEGWKRPT KK