Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_4566 |
Symbol | |
ID | 5107024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 5009164 |
End bp | 5010006 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640505837 |
Product | ABC transporter related |
Protein accession | YP_001190045 |
Protein GI | 146309580 |
COG category | [H] Coenzyme transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCAGTGA ATAGTGCCGC TGGCTGGCCT GCCAGTCTGT TCCCGCCACC CGCGAGCCGC CGTACGGCGG CGCCTGAGCC GCGCCTGCGC ATCCGTGATC TGGCCTGGTC GCCGGATGGC CAGCGCGCCT TGCTCGAGGC CATCGATCTG GAGATCGGCG ATGGTGAGCT GCTCGGTCTG ATCGGCCCCA ACGGCAGCGG CAAGACCAGC CTGCTGCGCT GCGCCTATCG CTTCCAGCGG CCGTGCAGTG GCCAGGTCGA ACTGGACGGC GAGGCGCTCT GGCAGCGCTC GCCGCGCTGG AGCGCGCAGC GCGTGGCGGT GGTGCTGCAG GAATTTCCGC AGGACTTCGG CCTGCGCGTG CACGAGGTGG CGGCCATGGG CCGTACGCCG CACAAGGGCC TGTTCGATGG CGACGATGCC GAGGATCGGC GCCTGGTGGA TGAGGCGCTG GCCCGTGTCG GTTTGAGCGA CCTGGCGCAG CAGCCCTTCG CCTGCCTCTC GGGTGGCGAG AAGCAGCGCG CTCTGCTTGC TCGCGCTTTG GTGCAGCAGC CGCAAGTGCT GATCCTCGAC GAGCCGACCA ACCACCTCGA CCCGCGCTAC CAGCTCGAAC TGCTGGGCCA GATCAAATCG CTGGGCCTGG CGACCCTGGC CAGCTTCCAT GACCTGAACC TGGCGGCGGC CTTCTGCGAC CGCCTCTGTG TGCTCGACCA GGGCCGTCTG GTGGCCGTCG GCACGCCCGC CGAGGTGCTC ACCGCCGAAC TGCTGCAGCA GGTGTTCGGC GTACGGGCGC TGGTCGATAC CCATCCACTG GCGGGGCATC CGCGTATTAC CTGGATTGTT TGA
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Protein sequence | MSVNSAAGWP ASLFPPPASR RTAAPEPRLR IRDLAWSPDG QRALLEAIDL EIGDGELLGL IGPNGSGKTS LLRCAYRFQR PCSGQVELDG EALWQRSPRW SAQRVAVVLQ EFPQDFGLRV HEVAAMGRTP HKGLFDGDDA EDRRLVDEAL ARVGLSDLAQ QPFACLSGGE KQRALLARAL VQQPQVLILD EPTNHLDPRY QLELLGQIKS LGLATLASFH DLNLAAAFCD RLCVLDQGRL VAVGTPAEVL TAELLQQVFG VRALVDTHPL AGHPRITWIV
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