| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4546 |
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| Symbol | |
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| ID | 5107004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4982884 |
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| End bp | 4983786 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640505817 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001190025 |
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| Protein GI | 146309560 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCA CCCGCCTGCG CACCCTGCGC GAACTGGCTC GCTGCCGCAC CATGGCGGCG
GCCGCCGAGT CGTTGCACCT GACGCCCTCG GCCGTCTCGC AGCAGGTCGC CCAGCTCGAG
CGCGAGGTCG ACATGGCGCT GATCGAACGG CGTGGTCGCG GTGTGGTACT GACGCCGGCC
GGTGAGCGGC TGGTGGCGCA TGCCGAGCGC ATCCTCATGG TGCTCGACGA GGCGCGCTCC
GAGCTGGCGC AGTTGCGCGG GGAAATCGCC GGTGAACTGC GTGTGGCGGC CTTTCCGTCG
ATTGCCGTGG CGGTGATCGC GGAAACCGTG CGCGCACTGC GCAGCGCCTA CCCGCGGCTG
AATGTGGTGG TGCTGGACCT TGAGCCGCAG GAAAGCCTCA GCGCCCTGGG CTCCTGGCAG
ATCGACGTGG CGGTGATCGA CGACCTGGCC GTGACCCCGG ACGAGAACCG CGAGCACTAC
GCGCTGATTC CCCTGACCCA GGACCTGCTA CATGTGCTGC TGCCCATCGA CCATGCCCTG
GCCCGGCGCG ACAGCCTGAC CATCGGCGAC CTGCGCGACG AAGCCTGGGC GCTGGATTCC
ACCGGCAGCT CGTTTGGCGA ATTCATCACC AACCTGTGCC GCCGCTCGGG CTTTGCGCCG
CGCATCAACG CCCACTGCGC GGGCTTTGAG ATGGTCGCGG CCATGGTCGC CTCGGGCAAT
TCCATCTCCA TCGTCTCCGG CCTGCGCCTG GTGCGCCCGC TGCCTGGCGT CACCGCCGTG
CCGCTGCTAC CCGATATCCA GCGCGGCGTG TTCCTCGCCT ACCGCAAGGG CGAGCGCGAT
CACCCGGCGG TGAACGTGTT TCTCGACGAG GCGGTGTATA CGGCTGACAG GGTGCTGGGT
TAG
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| Protein sequence | MDITRLRTLR ELARCRTMAA AAESLHLTPS AVSQQVAQLE REVDMALIER RGRGVVLTPA
GERLVAHAER ILMVLDEARS ELAQLRGEIA GELRVAAFPS IAVAVIAETV RALRSAYPRL
NVVVLDLEPQ ESLSALGSWQ IDVAVIDDLA VTPDENREHY ALIPLTQDLL HVLLPIDHAL
ARRDSLTIGD LRDEAWALDS TGSSFGEFIT NLCRRSGFAP RINAHCAGFE MVAAMVASGN
SISIVSGLRL VRPLPGVTAV PLLPDIQRGV FLAYRKGERD HPAVNVFLDE AVYTADRVLG
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