| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4487 |
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| Symbol | |
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| ID | 5107182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4919837 |
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| End bp | 4920355 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640505758 |
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| Product | hypothetical protein |
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| Protein accession | YP_001189966 |
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| Protein GI | 146309501 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
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| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACAC CCGCGTATCT GTCCCTCGAA GGCACCAAAC AAGGTCTGAT CACCGCTGGC
ACCTTCACCG AGGACTCGGT CGGCAACATT TTCCAGGAAG GTCATGAAGA CCAGATTCTG
GTGCAAGCCT ACAACCACCA GGTCATCATC CCGCGCGACC CGCAGTCCGG CCAACCGACT
GGCCAGCGCG TGCACAAGCC GCTGATGATC ACCAAGGTCT TCGACAAATC CTCGCCGCTG
ATCTTCAACG CCCTGACCTC CGGCGAGCGT CTGAACAAGT GCCGTCTGGA GTGGTACCGC
ACCTCCTCCA CCGGTACCCA GGAGCACTAC TTCACCATCG AACTGGAAGA CGCCGTGATC
GTCGACGTAC AGTCGCGCAT GCCGAACTGC CAGGACCCGA ACATGGCGCA CTTCACCCAC
CTGGAAGACG TCTACTTCAC CTACCGCAAG ATCGTCTGGA CCCACGAAGT CTCCGGCACT
TCCGGCTCCG ACGACTGGCG TACCCCGATC TCCGCCTAA
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| Protein sequence | MPTPAYLSLE GTKQGLITAG TFTEDSVGNI FQEGHEDQIL VQAYNHQVII PRDPQSGQPT
GQRVHKPLMI TKVFDKSSPL IFNALTSGER LNKCRLEWYR TSSTGTQEHY FTIELEDAVI
VDVQSRMPNC QDPNMAHFTH LEDVYFTYRK IVWTHEVSGT SGSDDWRTPI SA
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