Gene Pmen_4475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4475 
Symbol 
ID5107170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4905508 
End bp4906236 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content65% 
IMG OID640505746 
Productcarbonate dehydratase 
Protein accessionYP_001189954 
Protein GI146309489 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0288] Carbonic anhydrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTACA AACACCAGGT CATTCCGCTT CAGGCTCACG AGGGCAACGA AACCGCCGAG 
CAGGCGCTGC AGAGCATCGT CGAGGGCTTC AAGCGCTTTC GCAACGAGGT GTTCCCGCAG
CAGGAAGAGC TGTTCAAGAA GCTCGCCACC GCACAGAACC CGCGCGCCAT GTTCATCACC
TGCGCCGACT CGCGCGTGGT GCCGGAGCTG ATCACCCAGA GCTCCCCGGG CGACCTGTTC
GTCAACCGCA ACGTCGGCAA CGTGGTACCG CCCTACGGCC AGATGATGGG TGGCGTGTCC
ACCGCCATCG AGTACGCGGT GATGGCCCTG GGCGTGCAGC ACATCGTCAT CTGCGGCCAT
TCCGACTGCG GCGCGATGAA GGCGGTGCTC AATCCGGCCT CGCTGGAAAC CATGCCCACG
GTCAAGGCCT GGCTGCGCCA TGCCGAGGTT GCACGTACCG TGGTGGCGGA GAACTGCAAC
TGCGGCAGCG ACCAGGAAGC CCTGGCCGTG CTGACCGAAG AGAACGTGGT AGCCCAGCTC
GACCACCTGC GCACCCACCC TTCGGTGGCA GCCAAGCTGG CACGCGGCCA GCTGTTCATC
CACGGCTGGG TGTACGACAT CGAGACCAGC CAGATCAGGG CTTACGATGC CGAGTTGGGA
AGCTTCCTGC CGCTCGATGG CGACAAGGTC CCGATGGCCA CCCCGCGCGC GCGCTATCCG
CAGGACTGA
 
Protein sequence
MPYKHQVIPL QAHEGNETAE QALQSIVEGF KRFRNEVFPQ QEELFKKLAT AQNPRAMFIT 
CADSRVVPEL ITQSSPGDLF VNRNVGNVVP PYGQMMGGVS TAIEYAVMAL GVQHIVICGH
SDCGAMKAVL NPASLETMPT VKAWLRHAEV ARTVVAENCN CGSDQEALAV LTEENVVAQL
DHLRTHPSVA AKLARGQLFI HGWVYDIETS QIRAYDAELG SFLPLDGDKV PMATPRARYP
QD