Gene Pmen_4462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4462 
Symbol 
ID5107157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4891218 
End bp4891505 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content64% 
IMG OID640505733 
Productnucleic acid binding protein 
Protein accessionYP_001189941 
Protein GI146309476 
COG category[R] General function prediction only 
COG ID[COG3529] Predicted nucleic-acid-binding protein containing a Zn-ribbon domain 
TIGRFAM ID[TIGR02443] conserved hypothetical metal-binding protein 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATA CTCCAGTGAA CAGCACCCCG AAACGCTTTA TCGCCGGCGC CGTGTGCCCG 
GCATGCAGCG AGACCGACAG CATCAAGATG TGGAACGTCG ACGGCGTGCC GCACCGCGAA
TGCGTCAAGT GCGGCTATGC CGACACCCTG GACGCGCGCG GCAACTCGGT GCCCAAGGAG
CTGCCGACCC GGGTTAACGT CAGCGGCCTC AAGCCCAAGG CGGCCGATCC CAATGTGCAG
GCGGTGCAGT TCTTCCCCAA TCCCAAGCTG AAGAAGCCGA GCGAGTAA
 
Protein sequence
MSDTPVNSTP KRFIAGAVCP ACSETDSIKM WNVDGVPHRE CVKCGYADTL DARGNSVPKE 
LPTRVNVSGL KPKAADPNVQ AVQFFPNPKL KKPSE