| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4461 |
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| Symbol | |
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| ID | 5107156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4889173 |
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| End bp | 4891221 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640505732 |
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| Product | oligopeptidase A |
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| Protein accession | YP_001189940 |
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| Protein GI | 146309475 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGCGA ACAATCCCCT GCTGCAAGAC TTCGACCTGC CGCCCTACTC GCAGATCAAA
CCGGAGCACG TCGAGCCCGC CGTCGACCAG ATCCTGGCGG ACAGCCGCGC CGCCATCGCC
AAGCTGCTCG AGGCGCAGCA GGCCAACCCG AGCTGGGACG GTCTGGTGCT GGCGCTGGAC
GAACTGGGCG CACGCCTGGG CCGCGCCTGG AGCCCGGTGA GCCATCTCAA CTCGGTGTGC
AACAGCCCAG AGCTGCGCGC CGCTTACGAG GCCTGCCTGC CCAAGCTGTC CGAGTACTGG
ACCGAAATGG GCCAGAACAA GCCGCTGTTC CAGGCCTACG AGGCGCTGGC GCAGAGCCCG
GCGGCCGCCG ATTTCGACGT GGCGCAGAAG ACCATCCTCG AACACGCCCT GCGTGATTTC
CGCCTGTCCG GCATCGACCT GCCGGCCGAG CAGCAGAAGC GCTACGGCGA AATCCAGATG
CGCCTGTCCG AGCTGACCAG CAAGTTCTCC AACCAGCTGC TCGACGCCAC CCAGGCCTGG
ACCAAGCACA TCACCGACGA AGCCGTGCTG AGCGGCCTGA CCGACTCGGC CAAGGCGCAG
ATGAAGCAGG CCGCCGAGGC CAAGGGCCTG GACGGCTGGC TGATCACCCT GGAATTCCCC
AGCTACTACG CGGTGATGAC CTACGCCGAC GACCGCGCCC TGCGCGAAGA GGTGTATGCC
GCCTACTGCA CCCGCGCCTC CGACCAGGGG CCGAACGCCG GGCTGAACGA CAACGGCCCG
CTAATGGCCG AGATTCTCGA CCTGCGTCAG GAGCTGGCGC GCCTGCTCGG CTTCGCCAAC
TACAGCGAAC TGAGCCTGGC CAGCAAGATG GCCGAATCCA CCGACCAGGT GCTGAGCTTC
CTGCGCGACC TGGCGGTGCG CAGCAAACCC TTCGCCGAGC AGGACCTGGC CGAACTGAAA
GCCTTCGCCG CCGAGCAGGG CCTGAATGAC CTGCAAAGCT GGGACGTTGG CTACTACAGC
GAGAAGCTGC GCCAGCAGCG CTACAGCATC TCCCAGGAAG AGGTGCGCGC CTGGTTCCCG
GTGGACAAGG TGCTCAGCGG CCTGTTCGCC ATCGTGCAGA AGCTTTACGG CATCGAGATT
CGCGAGCTGA AAGACTTCAA CACCTGGCAT CCGGACGTGC GCCTGTTCGA GATCACCGAG
AACGGCCAGC ACGTCGGGCG CTTCTTCTTC GACCTCTACG CCCGCGCCAA CAAGCGCGGC
GGCGCCTGGA TGGACGGCGC CCGCGACAAG CGCCGCGACG CCCAGGGCAA GCTGATCGCC
CCGGTGGCCA ATCTGGTGTG CAACTTCACC CCGCCGGTCG GCGGCAAGCC GGCGCTGCTG
ACCCACGACG AGGTCACCAC CCTGTTCCAC GAATTCGGCC ATGGCCTGCA TCACCTGCTG
ACCCGCGTCG AGCACGCCGG CGCCTCGGGC ATCAACGGCG TGGCCTGGGA TGCGGTGGAG
CTGCCGAGCC AGTTCATGGA GAACTGGTGC TGGGAGCCCG AAGGCCTGGC GCTGATCTCC
GGCCACTATG AAACCGGCGA GGCGCTGCCG CAGGCCATGC TGGACAAGAT GCTGGCGGCG
AAGAACTTCC AGTCCGGGCT GATGATGGTG CGTCAGCTGG AGTTCTCCCT GTTCGACTTC
GAGCTGCACG CCAGCCACGG CGACGGTCGC AGCGTGCTGG ACGTGCTCGA AGGCGTGCGC
AATGAGGTCT CGGTACTGCG CCCGCCGGCC TACAACCGTT TCGCCAACGG CTTTGCGCAC
ATCTTCGCCG GCGGCTATGC GGCCGGTTAC TACAGCTACA AGTGGGCCGA AGTGCTCAGT
GCCGATGCCT TCTCCAAGTT CGAGGAAGAA GGCGTGTTCA ACGCCGATAC CGGCCGCGCC
TTCCGCGAAG CGATCCTCGC CCGTGGCGGC TCGCAGGAGC CCATGGTGTT GTTCGTCGAC
TTCCGCGGTC GCGAGCCGAG CATCGACGCC CTGCTGCGCC ACCTCGGCCT GAGCCAGGAG
GCCGCATGA
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| Protein sequence | MTANNPLLQD FDLPPYSQIK PEHVEPAVDQ ILADSRAAIA KLLEAQQANP SWDGLVLALD
ELGARLGRAW SPVSHLNSVC NSPELRAAYE ACLPKLSEYW TEMGQNKPLF QAYEALAQSP
AAADFDVAQK TILEHALRDF RLSGIDLPAE QQKRYGEIQM RLSELTSKFS NQLLDATQAW
TKHITDEAVL SGLTDSAKAQ MKQAAEAKGL DGWLITLEFP SYYAVMTYAD DRALREEVYA
AYCTRASDQG PNAGLNDNGP LMAEILDLRQ ELARLLGFAN YSELSLASKM AESTDQVLSF
LRDLAVRSKP FAEQDLAELK AFAAEQGLND LQSWDVGYYS EKLRQQRYSI SQEEVRAWFP
VDKVLSGLFA IVQKLYGIEI RELKDFNTWH PDVRLFEITE NGQHVGRFFF DLYARANKRG
GAWMDGARDK RRDAQGKLIA PVANLVCNFT PPVGGKPALL THDEVTTLFH EFGHGLHHLL
TRVEHAGASG INGVAWDAVE LPSQFMENWC WEPEGLALIS GHYETGEALP QAMLDKMLAA
KNFQSGLMMV RQLEFSLFDF ELHASHGDGR SVLDVLEGVR NEVSVLRPPA YNRFANGFAH
IFAGGYAAGY YSYKWAEVLS ADAFSKFEEE GVFNADTGRA FREAILARGG SQEPMVLFVD
FRGREPSIDA LLRHLGLSQE AA
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