Gene Pmen_4460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_4460 
Symbol 
ID5107155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp4888494 
End bp4889036 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content67% 
IMG OID640505731 
Productcarbonic anhydrase 
Protein accessionYP_001189939 
Protein GI146309474 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGATTC GCAGTTTCCA GCAATACACC CCGCAGCTCG GTGAACGAGT CTTTGTCGAC 
GCCAGCGCGG TGGTGCTGGG CGACGTGGAA ATCGGTGCCG ACAGCTCGGT GTGGCCGATG
GCGGTGGTGC GCGGCGACAT GCACAGCATC CGCATCGGCG CGCGCAGCAG CGTGCAGGAC
GGCAGCGTGC TGCACATCAC CCACGCCGGG CCGTTCAACC CGGCCGGCTA TCCGTTGATC
ATCGGCGACG AGGTCACCAT CGGCCACAAC GTCACCCTGC ATGGCTGCAC CCTGGGCAAC
CGCATCCTGG TCGGCATGGG CAGCATCGTC ATGGATGGCG CGGTGGTCGA GGACGAGGTG
GTGATCGGCG CCGGCTCCCT GGTGCCCCCG GGCAAGCGCC TGGAAAGCGG CTACCTGTAC
GTCGGCAGCC CGGTGAAGCA GGCGCGCGCG CTGACCGAGC AGGAGCGCAG CTACTTCGCC
TACAGCGCGG CCAACTACGT GCGGCTGAAG GATCTGCACC TGGTCGAGGG GTATGACGGT
TGA
 
Protein sequence
MAIRSFQQYT PQLGERVFVD ASAVVLGDVE IGADSSVWPM AVVRGDMHSI RIGARSSVQD 
GSVLHITHAG PFNPAGYPLI IGDEVTIGHN VTLHGCTLGN RILVGMGSIV MDGAVVEDEV
VIGAGSLVPP GKRLESGYLY VGSPVKQARA LTEQERSYFA YSAANYVRLK DLHLVEGYDG