| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4457 |
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| Symbol | |
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| ID | 5107152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4886113 |
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| End bp | 4886760 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640505728 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001189936 |
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| Protein GI | 146309471 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCACG CGTCCATCCT CTTCGATCTC GACGGCACCC TCACCGATCC GCGCGAGGGT
ATTACCCGCT CGGTGCAGTA CGCGCTGGCC AAGCTGGGCA TCGACGAGCC GGATCTGACG
GCGCTGGAAC ACTTCATCGG CCCGCCCCTG TTGCAGTGCT TCATGGCTAC CTACGCGCTG
GACGAAGCCA CCGGCTGGCA GGCGGTGAAC CATTATCGCG AGCGCTTCAA GGTCACCGGG
TTGTACGAGA ACCGCCTGTT CGATGGGGTC GATGCCCTGC TGCAGGGGTT GGTGGCGCAG
GGGCGCACCC TGTACATCGC CACCAGCAAA CCGACGGTGT TCGCCGAGGA AATCGCCCGG
CATTTCGGTT TCGACCGCTA CTTCAAGCGC ATCTACGGCA GCGAGCTGGA CGGCACCCGC
ACCAACAAGG TGGAGCTGCT GGCGCATCTG CTGGAGTGCG AGCGGCTGGC GCCGGAATCG
GCATTGATGA TCGGCGATCG CAAGCACGAC CTGATCGGGG CTCGCCAGAA CGGCTTGCAG
GCGGTGGCGG TGGGCTATGG CTTCGGTAGC CGCGAGGAGC TACTCGGCGA GGCGCCGGCC
TTTCATTTCG AGACGCTGGA AGAGATGCAC CGGGCATTCA TCCGCTAG
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| Protein sequence | MHHASILFDL DGTLTDPREG ITRSVQYALA KLGIDEPDLT ALEHFIGPPL LQCFMATYAL
DEATGWQAVN HYRERFKVTG LYENRLFDGV DALLQGLVAQ GRTLYIATSK PTVFAEEIAR
HFGFDRYFKR IYGSELDGTR TNKVELLAHL LECERLAPES ALMIGDRKHD LIGARQNGLQ
AVAVGYGFGS REELLGEAPA FHFETLEEMH RAFIR
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