| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4447 |
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| Symbol | |
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| ID | 5107142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4876794 |
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| End bp | 4877822 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640505718 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001189926 |
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| Protein GI | 146309461 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCC TCCATGACAC CGCGCAGGCC TCGGTCAGCG CCAGCCTGAC CCAGGCCATC
CTGCATGCCG CCGGGCGCCT CGGCCTCGAA CGCCAGGCGC TGCTGAGCGC CTGCGGCCTG
GGCGAAAGCC AGTTGGCCGA CCCCGATGCG CGCGTGCCCT TTACCGCTCA GGAGGCGCTG
TGGTGCGCGC TCAGCGCACG CCTGCAGCAT CCCGAGCCCG GTCTGCTGCT GGGCTGCAAC
CTGACACCGG GCCCGTTCAG CGTGCTCAAC TACCTGCTGC AGAGCAGCGC CACCCTCGGC
GATGCCCTGA ATGCGGCGCA GCGCTATCAG CGCCTGGTCG GCGAAGGCGG CGAGCTGCGC
GTCGAGCAAC AGGACGACCG ACTGACGCTG CTCTACAGCC CGCTGCACCC GCAGCACCCG
GCCACGCGCA TGCGGGTGCT GGCGATGATG GCCTGCTGGG TGCGGATGAT GGCTCCGCTG
CTGGACGACT TTCATCTGCT CGGCGTGCAG TTCCGCCACG CCGCACCGAG CGATCTCGCG
CCGTACCGGA GCGTGTTCGC CTGCCCGCTA CGCTTTGCCG CGGCCGACTA CACCATCGCC
CTGCCCCGCG CCCTTGGCGA CGCTCCGCTG ATCCCGGCCA ACCCGCCCCT GCAGCAGCTG
CTGCGCCAGC ATGCCGAAGC CCTACTGGCC CGCCTGCCCA GCGCCAGCCT GAGTGCTCGG
GTGATCGGCC TGCTCGGCGA ACAGCTGGCC CATGGCGAGC CGGACCGCGC GCAACTGGCC
CGCGCCCTGC ACCTGAGCGA ACGCACCCTG CAAAGGCGTC TGGCCGAGGA GGGGTGCAAC
TATCAGCAGC TGCTCGCCGA CACCCGCCGC CAACTGGCCG AACGCTACCT GCGCGAGGGC
CGCCTGCCGG CGGCGGAGAT CGCCCTGCTG CTCGGCTATT CCGAACCCAG CGTGTTCTTT
CGCGCCTTTC GCCAGTGGAC CGGCCTGCCC CCCGGCGAGT ACCGCGCCCA ACAAGCGAGT
GATGCCTAA
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| Protein sequence | MPALHDTAQA SVSASLTQAI LHAAGRLGLE RQALLSACGL GESQLADPDA RVPFTAQEAL
WCALSARLQH PEPGLLLGCN LTPGPFSVLN YLLQSSATLG DALNAAQRYQ RLVGEGGELR
VEQQDDRLTL LYSPLHPQHP ATRMRVLAMM ACWVRMMAPL LDDFHLLGVQ FRHAAPSDLA
PYRSVFACPL RFAAADYTIA LPRALGDAPL IPANPPLQQL LRQHAEALLA RLPSASLSAR
VIGLLGEQLA HGEPDRAQLA RALHLSERTL QRRLAEEGCN YQQLLADTRR QLAERYLREG
RLPAAEIALL LGYSEPSVFF RAFRQWTGLP PGEYRAQQAS DA
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