| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4430 |
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| Symbol | |
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| ID | 5107125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4857688 |
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| End bp | 4858584 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640505701 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001189909 |
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| Protein GI | 146309444 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.3079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.432703 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCGCA AGATCCCAAG CACCGCTGCC CTGGTCGCCT TCGAGTCCGC CGCGCGCCAC
CAGAGCTTCA CCAAGGCCGC AGACGAGCTC AACCTGACGC AGAGCGCGAT CTGCCGACAG
ATCGGCGGGC TGGAAAGCTT TCTCAATGTC GAGCTGTTTC GCCGTTCGCG ACGCGGCGTG
GTGCTGACCG AGGCAGGGGT GGCGTACAGC CGCAGGGTCG CGGCACAGCT CGATGCGGTG
GAACGCGACA CCCTGGCGCT GATGGGCAAC CAGGGCACCA CCAGCATCGA GCTGGCGGTG
GTGCCAACCT TCGGCACGCA GTGGCTACTG CCGCGCCTGC GCACCTTCCA GCAACTGCAC
CCGGAAGTGA CGGTGCACCT GACCAACCGC ACCCGCCCCT TCCTGTTCGC CGACACTCAT
TTTGATGCCG CCATCTACTA TGGCGATGCC GAATGGTCGG GCACCGAGGC GCACTTTCTG
ATGCATGAGC ATCTGCTGCC GGTCTGCAGC CCGAAATTGC TGGGCGACGA ACCGGTCACT
GCCGAGCGCA TCGCCGCACT GCCCCTGCTG CAGCAGACCA CCCGCCCCTA TGCCTGGCGT
CAGTGGTTCG CCGCGCAGGG CATGAGCGTA CCCCGCGACA TGACCGGTCC GCGCCTGGAA
CTGTTCTCCA TGCTGGCGCA GGCCGCGCGC CACGAAATGG GCGTCGCCCT GATCCCGCCC
TTCCTGATTC AACGCGAACT GGACGAGGGC AGCCTGGTCA TAGCCTTGAA CAGGGCAGTC
CCGAGCCATG ACCACGCCTA TTACCTGATG GTGCCAGAGC GCAAGACCGA GTCGGCGGCG
CTCAAGGCAT TTCGCGATTG GCTGCTGCTT CAGGCCCGCG CGTACCGACA GGAATGA
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| Protein sequence | MRRKIPSTAA LVAFESAARH QSFTKAADEL NLTQSAICRQ IGGLESFLNV ELFRRSRRGV
VLTEAGVAYS RRVAAQLDAV ERDTLALMGN QGTTSIELAV VPTFGTQWLL PRLRTFQQLH
PEVTVHLTNR TRPFLFADTH FDAAIYYGDA EWSGTEAHFL MHEHLLPVCS PKLLGDEPVT
AERIAALPLL QQTTRPYAWR QWFAAQGMSV PRDMTGPRLE LFSMLAQAAR HEMGVALIPP
FLIQRELDEG SLVIALNRAV PSHDHAYYLM VPERKTESAA LKAFRDWLLL QARAYRQE
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