| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4428 |
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| Symbol | |
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| ID | 5106727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 4855052 |
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| End bp | 4856275 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640505699 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001189907 |
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| Protein GI | 146309442 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000922953 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.414571 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGGCG CTCTGTCCCA TATCCGTGTG CTCGACCTGT CTCGCGTGCT CGCCGGCCCC
TGGTGCGGGC AGATCCTGGG TGATCTGGGC GCCGAGGTGA TCAAGGTCGA GCGGCCGGGA
AGCGGGGACG ACACTCGGCA TTGGGGGCCT CCCTATATAA AGGACGCCGA AGGCAATGAT
TCGCGTGAGG CGGCTTACTT CCAGAGCGCC AATCGCAACA AACAGTCGCT GACCCTGGAC
TTCACCCAGC CTGAAGGGCA GCGACTGGTT CGTGAGCTGG TCGCGCAGTG CGATGTACTG
CTGGAGAACT TCAAGGTCGG CGGCCTGGCG GCCTATGGCT TGGATTATGA ATCGCTGAAG
GCGATCAATC CGCGTCTGAT CTACTGCTCC ATCACCGGCT TCGGCCAAAC CGGTCCTTAT
GCCAAGCGTG CCGGTTACGA TTTCATGATC CAGGGGCTCG GCGGTCTGAT GAGTTTGACC
GGGCGTCCTG AAGGTGAAGA GGGGGCGGGG CCGATGAAGG TCGGTGTGGC GCTGACCGAT
ATCCTTACCG GGCTCTATGC GACCGTGGGC GTGCTGGCTG CACTGAATCA GCGTGAGCAG
TCCGGTATCG GCCAGCATAT AGATGTGGCA TTGCTCGACG TCCAGGTCGC CTGTCTGGCC
AACCAGGCCA TGAACTACCT GGCAACGGGT GTATCGCCCA GGCGTCTGGG TAATGCCCAC
CCCAATATCG TGCCGTACCA GGACTTTCCC AGCGCCGACG GTAATTTCAT CCTGGCCGTG
GGTAACGACG GTCAGTTCCG CAAGTTCTGC GAGGTCGCCG GCCTTCCGGC TTTGGCCGAC
GATCCGCGTT TTTCCACCAA TAAGGCTCGG GTCGCGCATC GTGCCGAGCT GATTCCGCTG
CTGCGGCAGG CCACGGTATT CAAGACCACG ACGCAGTGGA TCGAATTGCT GGAGAAGGCC
GGTGTGCCGT GTGGGCCGAT CAACGATCTA CAGCAGGTGT TCGCCGATCC GCAGGTGCAG
GCGCGTGGGC TGCGTATCGA CCTGCCCAAC GCCATGGGCA GCACTACGCC GCAAGTCGCC
AGTCCGCTGC GCCTATCTGC TACGCCAGTG GCTTATCGCT CGGCTCCGCC ATTGTTGGGG
CAGCACACCG AGGCCCTGTT GCAGAGACTG CTAGGTATGA GCGAAACACA GGTTGCAGAG
CTGCGTGAGG CGGGTGTGAT CTGA
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| Protein sequence | MPGALSHIRV LDLSRVLAGP WCGQILGDLG AEVIKVERPG SGDDTRHWGP PYIKDAEGND
SREAAYFQSA NRNKQSLTLD FTQPEGQRLV RELVAQCDVL LENFKVGGLA AYGLDYESLK
AINPRLIYCS ITGFGQTGPY AKRAGYDFMI QGLGGLMSLT GRPEGEEGAG PMKVGVALTD
ILTGLYATVG VLAALNQREQ SGIGQHIDVA LLDVQVACLA NQAMNYLATG VSPRRLGNAH
PNIVPYQDFP SADGNFILAV GNDGQFRKFC EVAGLPALAD DPRFSTNKAR VAHRAELIPL
LRQATVFKTT TQWIELLEKA GVPCGPINDL QQVFADPQVQ ARGLRIDLPN AMGSTTPQVA
SPLRLSATPV AYRSAPPLLG QHTEALLQRL LGMSETQVAE LREAGVI
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